RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 STX18Q9P2W9 335 aaKnown RBP10.57□□□□□ -0.72
SPG11-219ENST00000559822 GPR160Q9UJ42 338 aa10.57□□□□□ -0.72
SPG11-219ENST00000559822 A0A1W2PPW3 197 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 A0A1W2PRG6 482 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 LRP5LA4QPB2 252 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 BBIP1A8MTZ0 92 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 MCIDASD6RGH6 385 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 BLOC1S5-TXNDC5H3BN57 136 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 DHHO43323 396 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 LILRA1O75019 489 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 LYPD3O95274 346 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 IGF2P01344 180 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 THY1P04216 161 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 PGA4P0DJD7 388 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 PGA3P0DJD8 388 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 TROVE2P10155 538 aaKnown RBP eCLIP10.56□□□□□ -0.72
SPG11-219ENST00000559822 NR2C1P13056 603 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 DAP3P51398 398 aaKnown RBP10.56□□□□□ -0.72
SPG11-219ENST00000559822 ZNF84P51523 738 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 TAS2R41P59536 307 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 RIN1Q13671 783 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 MELKQ14680 651 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 RAB39AQ14964 217 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 MAPRE2Q15555 327 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 FXNQ16595 210 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 NANOGP8Q6NSW7 305 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 CARM1Q86X55 608 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 SKA3Q8IX90 412 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 ARIH2OSQ8N7S6 290 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 SLC30A7Q8NEW0 376 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 OR8J3Q8NGG0 315 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 OR4D11Q8NGI4 311 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 OR1J2Q8NGS2 313 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 SYT3Q9BQG1 590 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 LRMDAQ9H2I8 198 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 TPK1Q9H3S4 243 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 RNF121Q9H920 327 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 NANOGQ9H9S0 305 aa10.56□□□□□ -0.72
SPG11-219ENST00000559822 IQCMA0A1B0GVH7 501 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 OR5F1O95221 314 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 MT-ND1P03886 318 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 QDPRP09417 244 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 THRBP10828 461 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 ACHEP22303 614 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 IFNA8P32881 189 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 PLP2Q04941 152 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 TBC1D28Q2M2D7 210 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 CR1LQ2VPA4 569 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 RGS7BPQ6MZT1 257 aaPredicted RBP10.55□□□□□ -0.72
SPG11-219ENST00000559822 LRFN4Q6PJG9 635 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 SLC16A14Q7RTX9 510 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 WDFY1Q8IWB7 410 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 LRRC17Q8N6Y2 441 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 NOXO1Q8NFA2 376 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 OR4K5Q8NGD3 323 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 SNX33Q8WV41 574 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 RDH5Q92781 318 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 LRRC58Q96CX6 371 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 SGTBQ96EQ0 304 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 SNX18Q96RF0 628 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 TMEM120AQ9BXJ8 343 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 KCNN2Q9H2S1 579 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 CDH20Q9HBT6 801 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 DUSP13Q9UII6 198 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 SH3GLB1Q9Y371 365 aa10.55□□□□□ -0.72
SPG11-219ENST00000559822 HTR3EA5X5Y0 456 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 GMNCA6NCL1 334 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 FBP2O00757 339 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 SNAP29O95721 258 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 IGFBP1P08833 259 aaPredicted RBP10.54□□□□□ -0.72
SPG11-219ENST00000559822 FUT1P19526 365 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 SRP14P37108 136 aaKnown RBP10.54□□□□□ -0.72
SPG11-219ENST00000559822 RAD52P43351 418 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 ALDH3B1P43353 468 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 GPR6P46095 362 aaPredicted RBP10.54□□□□□ -0.72
SPG11-219ENST00000559822 GZMMP51124 257 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 CDH15P55291 814 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 MRPS11P82912 194 aaKnown RBP10.54□□□□□ -0.72
SPG11-219ENST00000559822 RPL18Q07020 188 aaKnown RBP10.54□□□□□ -0.72
SPG11-219ENST00000559822 MOGQ16653 247 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 HIST3H3Q16695 136 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 NKPD1Q17RQ9 610 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 RABL3Q5HYI8 236 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 LIPNQ5VXI9 398 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 DEF8Q6ZN54 512 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 IL17RELQ6ZVW7 336 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 CALHM3Q86XJ0 350 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 ZNF584Q8IVC4 421 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 PCYOX1LQ8NBM8 494 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 TMEM239Q8WW34 195 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 MCHR2Q969V1 340 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 PRSS27Q9BQR3 290 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 ZNF416Q9BWM5 594 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 BCL2L14Q9BZR8 327 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 MEPEQ9NQ76 525 aaPredicted RBP10.54□□□□□ -0.72
SPG11-219ENST00000559822 INIPQ9NRY2 104 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 GID8Q9NWU2 228 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 SLCO1C1Q9NYB5 712 aa10.54□□□□□ -0.72
SPG11-219ENST00000559822 TMEFF2Q9UIK5 374 aaPredicted RBP10.54□□□□□ -0.72
SPG11-219ENST00000559822 MED31Q9Y3C7 131 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms