RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 IGKV1D-43A0A0B4J1Z2 117 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 H3BN98 237 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 ZG16O60844 167 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 IGHG1P01857 330 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 RNF224P0DH78 156 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 BMP5P22003 454 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 SMSP52788 366 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 LGALS3BPQ08380 585 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 CAMK2DQ13557 499 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 LRRC36Q1X8D7 754 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 TMEM236Q5W0B7 351 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 FBXW10Q5XX13 1052 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 SLC25A47Q6Q0C1 308 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 CASP12Q6UXS9 341 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 ZBTB46Q86UZ6 589 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 IQCF1Q8N6M8 205 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 ZNF566Q969W8 418 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 OPN3Q9H1Y3 402 aaPredicted RBP13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 FAM118AQ9NWS6 357 aa13.05□□□□□ -0.32
SNRPA1-207ENST00000559309 OR6C68A6NDL8 312 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 ZNF726A6NNF4 738 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 SERPINI2O75830 405 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 SLC2A10O95528 541 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 ITGA5P08648 1049 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 CDH2P19022 906 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 GGT2P36268 569 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 FOXG1P55316 489 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 MYBPC1Q00872 1141 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 KEAP1Q14145 624 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 SLC25A30Q5SVS4 291 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 THEM4Q5T1C6 240 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 BEND4Q6ZU67 534 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 USP51Q70EK9 711 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 SLC37A3Q8NCC5 494 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 MCHR2Q969V1 340 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 ZNF837Q96EG3 531 aaPredicted RBP13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 NELFAQ9H3P2 528 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 FN3KQ9H479 309 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 C12orf49Q9H741 205 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 GPR35Q9HC97 309 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 COQ3Q9NZJ6 369 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 KLHL21Q9UJP4 597 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 UGT2A1Q9Y4X1 527 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 ICE1Q9Y2F5 2266 aa13.04□□□□□ -0.32
SNRPA1-207ENST00000559309 IGLV1-36A0A0B4J1U3 117 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 DCTN6O00399 190 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 ARHGEF9O43307 516 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 HMGN1P05114 100 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 GABRB1P18505 474 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 PSMB1P20618 241 aaKnown RBP13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 IGHV1-2P23083 117 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 CSNK1A1P48729 337 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 ASCL1P50553 236 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 IL1RL1Q01638 556 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 TOP3AQ13472 1001 aaPredicted RBP13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 P2RY6Q15077 328 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 NRN1LQ496H8 165 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 ZNF100Q8IYN0 542 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 GALNT4Q8N4A0 578 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 OR4K13Q8NH42 304 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 TFAP2CQ92754 450 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 PTP4A1Q93096 173 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 NMNAT3Q96T66 252 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 RACGAP1Q9H0H5 632 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 OR10A4Q9H209 315 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 ELOVL5Q9NYP7 299 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 CACNA1CQ13936 2221 aa13.03□□□□□ -0.32
SNRPA1-207ENST00000559309 ADGRG4Q8IZF6 3080 aa13.02□□□□□ -0.32
SNRPA1-207ENST00000559309 LOC100130705A0A1B0GUX0 176 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 H0YAE9 185 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 CLDN14O95500 239 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 NR2C1P13056 603 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 CTLA4P16410 223 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 SLC2A5P22732 501 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 POU1F1P28069 291 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 MPGP29372 298 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 CCKARP32238 428 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 SLC25A1P53007 311 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 FMODQ06828 376 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 ITGADQ13349 1161 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 CRMP1Q14194 572 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 ZIK1Q3SY52 487 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 SLC35F1Q5T1Q4 408 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 STAC2Q6ZMT1 411 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNF433Q8N7K0 673 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 C1orf162Q8NEQ5 155 aaPredicted RBP13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 SDR9C7Q8NEX9 313 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 TRUB1Q8WWH5 349 aaKnown RBP13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 MUS81Q96NY9 551 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 HCAR1Q9BXC0 346 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 SYT4Q9H2B2 425 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 RIBC2Q9H4K1 309 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 ASB6Q9NWX5 421 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 ORC6Q9Y5N6 252 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 FKBP7Q9Y680 259 aa13.02□□□□□ -0.33
SNRPA1-207ENST00000559309 ZNF99A8MXY4 864 aaPredicted RBP13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 H7C1C5 153 aa13.01□□□□□ -0.33
SNRPA1-207ENST00000559309 XKRYO14609 159 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms