RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 FAAHO00519 579 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 FCMRO60667 390 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 H1F0P07305 194 aaKnown RBP14□□□□□ -0.17
CDC42BPB-203ENST00000558867 GNAO1P09471 354 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 PRKACGP22612 351 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 CBLP22681 906 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 PAX7P23759 505 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 EDNRAP25101 427 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 RYKP34925 604 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 SRP14P37108 136 aaKnown RBP14□□□□□ -0.17
CDC42BPB-203ENST00000558867 APOBEC1P41238 236 aaKnown RBP14□□□□□ -0.17
CDC42BPB-203ENST00000558867 RNF144AP50876 292 aaPredicted RBP14□□□□□ -0.17
CDC42BPB-203ENST00000558867 CDH12P55289 794 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 SRSF2Q01130 221 aaKnown RBP14□□□□□ -0.17
CDC42BPB-203ENST00000558867 PPP1R8Q12972 351 aaKnown RBP14□□□□□ -0.17
CDC42BPB-203ENST00000558867 NDUFAF6Q330K2 333 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 LIN52Q52LA3 116 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 ABLIM2Q6H8Q1 611 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 ZNF770Q6IQ21 691 aaPredicted RBP14□□□□□ -0.17
CDC42BPB-203ENST00000558867 C12orf54Q6X4T0 127 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 OFCC1Q8IZS5 231 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 OR10G2Q8NGC3 310 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 OR4D11Q8NGI4 311 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 FBLIM1Q8WUP2 373 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 PRR14Q9BWN1 585 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 NMNAT1Q9HAN9 279 aaPredicted RBP14□□□□□ -0.17
CDC42BPB-203ENST00000558867 KRT84Q9NSB2 600 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 KIF17Q9P2E2 1029 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 MYRFQ9Y2G1 1151 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 HDGFL3Q9Y3E1 203 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 CHST2Q9Y4C5 530 aa14□□□□□ -0.17
CDC42BPB-203ENST00000558867 LOC100130705A0A1B0GUX0 176 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 A6NHS1 94 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 TRIM64CA6NLI5 447 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 J3KTA2 159 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 FMO6PO60774 539 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 CCNB2O95067 398 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 PMS2P2O95744 297 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 ERCC1P07992 297 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 PCMT1P22061 227 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 CLK1P49759 484 aaKnown RBP13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 PRPS1P60891 318 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 NPTX1Q15818 432 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 ZNF691Q5VV52 312 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 SLC46A3Q7Z3Q1 461 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 THAP5Q7Z6K1 395 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 COMTD1Q86VU5 262 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 C8orf59Q8N0T1 100 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 ATG16L2Q8NAA4 619 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 SETD9Q8NE22 299 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 ZNF563Q8TA94 476 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 VRK1Q99986 396 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 QRSL1Q9H0R6 528 aaKnown RBP13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 ARMC7Q9H6L4 198 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 SLC13A4Q9UKG4 626 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 TMCC3Q9ULS5 477 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 PCDHGB5Q9Y5G0 923 aa13.99□□□□□ -0.17
CDC42BPB-203ENST00000558867 ZNF716A6NP11 495 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 VSTM5A8MXK1 200 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 NPIPB9F8W1W9 429 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 UGT2B17O75795 530 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 LY6HO94772 140 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 CSTAP01040 98 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 SMIM18P0DKX4 95 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 IFNA8P32881 189 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 SLC16A1P53985 500 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 TUBA4AP68366 448 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 APOFQ13790 326 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 ZNF141Q15928 474 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 CR1LQ2VPA4 569 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 ZIK1Q3SY52 487 aaPredicted RBP13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 PDZK1Q5T2W1 519 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 CASP12Q6UXS9 341 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 CD300LDQ6UXZ3 194 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 VRK2Q86Y07 508 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 OR6T1Q8NGN1 323 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 ZG16BQ96DA0 208 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 FOXN4Q96NZ1 517 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 FEVQ99581 238 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 NAA11Q9BSU3 229 aaPredicted RBP13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 DGCR6LQ9BY27 220 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 MRPS26Q9BYN8 205 aaKnown RBP13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 SLC17A5Q9NRA2 495 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 CHRNA9Q9UGM1 479 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 MKLN1Q9UL63 735 aa13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 NDRG4Q9ULP0 352 aaKnown RBP13.98□□□□□ -0.17
CDC42BPB-203ENST00000558867 B9A039 149 aa13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 M0R3H8 397 aa13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 EIF1BO60739 113 aaKnown RBP13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 OR5F1O95221 314 aa13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 IL7RP16871 459 aa13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 ESRRGP62508 458 aa13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 NPRL3Q12980 569 aa13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 SCGB2A2Q13296 93 aa13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 SKP2Q13309 424 aa13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 GPR68Q15743 365 aa13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 SWI5Q1ZZU3 235 aa13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 RBM48Q5RL73 367 aaKnown RBP13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 TTC33Q6PID6 262 aaPredicted RBP13.97□□□□□ -0.17
CDC42BPB-203ENST00000558867 DEF8Q6ZN54 512 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms