RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 MCHR2Q969V1 340 aa19.91■□□□□ 0.78
TDP1-216ENST00000556867 CCDC124Q96CT7 223 aaKnown RBP19.91■□□□□ 0.78
TDP1-216ENST00000556867 CLPTM1LQ96KA5 538 aa19.91■□□□□ 0.78
TDP1-216ENST00000556867 THTPAQ9BU02 230 aa19.91■□□□□ 0.78
TDP1-216ENST00000556867 KATNB1Q9BVA0 655 aa19.91■□□□□ 0.78
TDP1-216ENST00000556867 MAGIXQ9H6Y5 334 aa19.91■□□□□ 0.78
TDP1-216ENST00000556867 B3GNT2Q9NY97 397 aa19.91■□□□□ 0.78
TDP1-216ENST00000556867 POU2F3Q9UKI9 436 aa19.91■□□□□ 0.78
TDP1-216ENST00000556867 E7EQL1 145 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 SOD3P08294 240 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 CECR9P0C854 216 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 PAX1P15863 534 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 ZNF26P17031 533 aaPredicted RBP19.9■□□□□ 0.78
TDP1-216ENST00000556867 RRM2P31350 389 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 ARR3P36575 388 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 DTX2Q86UW9 622 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 MDP1Q86V88 176 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 IGFN1Q86VF2 1251 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 SYT14Q8NB59 555 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 ZNF519Q8TB69 540 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 NANOS1Q8WY41 292 aaKnown RBP19.9■□□□□ 0.78
TDP1-216ENST00000556867 HDAC2Q92769 488 aaKnown RBP19.9■□□□□ 0.78
TDP1-216ENST00000556867 SLC7A6OSQ96CW6 309 aaPredicted RBP19.9■□□□□ 0.78
TDP1-216ENST00000556867 NMD3Q96D46 503 aaKnown RBP19.9■□□□□ 0.78
TDP1-216ENST00000556867 KCNK17Q96T54 332 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 ALG12Q9BV10 488 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 GSX2Q9BZM3 304 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 NDEL1Q9GZM8 345 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 CXorf56Q9H5V9 222 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 FAIMQ9NVQ4 179 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 TMEM38BQ9NVV0 291 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 ZNF346Q9UL40 294 aaKnown RBP19.9■□□□□ 0.78
TDP1-216ENST00000556867 LAMP3Q9UQV4 416 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 SIGLEC7Q9Y286 467 aa19.9■□□□□ 0.78
TDP1-216ENST00000556867 ATP6V1G2-DDX39BF2Z307 99 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 GYG2O15488 501 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 ENTPD5O75356 428 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 HLA-HP01893 362 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 NR2C1P13056 603 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 CAPZA2P47755 286 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 NAAAQ02083 359 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 NRN1LQ496H8 165 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 C10orf128Q5T292 105 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 MED13LQ71F56 2210 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 KRTAP1-3Q8IUG1 177 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 TSPAN32Q96QS1 320 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 DHRS9Q9BPW9 319 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 GRIP2Q9C0E4 1043 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 SMURF2Q9HAU4 748 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 ZNF701Q9NV72 531 aaPredicted RBP19.89■□□□□ 0.77
TDP1-216ENST00000556867 ZNF224Q9NZL3 707 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 MOKQ9UQ07 419 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 AURKCQ9UQB9 309 aa19.89■□□□□ 0.77
TDP1-216ENST00000556867 A6NIZ1 184 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 ACOT8O14734 319 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 PTP4A3O75365 173 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 CRYAAP02489 173 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 CD14P08571 375 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 RPL4P36578 427 aaKnown RBP19.88■□□□□ 0.77
TDP1-216ENST00000556867 ZNF84P51523 738 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 IDH3GP51553 393 aaPredicted RBP19.88■□□□□ 0.77
TDP1-216ENST00000556867 RAP1BP61224 184 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 RAP1AP62834 184 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 MYBPC1Q00872 1141 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 TRAP1Q12931 704 aaKnown RBP19.88■□□□□ 0.77
TDP1-216ENST00000556867 GSG1Q2KHT4 349 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 MYPOPQ86VE0 399 aaPredicted RBP19.88■□□□□ 0.77
TDP1-216ENST00000556867 SLC22A24Q8N4F4 322 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 RSRC1Q96IZ7 334 aaKnown RBP19.88■□□□□ 0.77
TDP1-216ENST00000556867 KCNS3Q9BQ31 491 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 DENND2DQ9H6A0 471 aaPredicted RBP19.88■□□□□ 0.77
TDP1-216ENST00000556867 SEC61A2Q9H9S3 476 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 NOX3Q9HBY0 568 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 ATP23Q9Y6H3 246 aa19.88■□□□□ 0.77
TDP1-216ENST00000556867 TEP1Q99973 2627 aaKnown RBP19.88■□□□□ 0.77
TDP1-216ENST00000556867 UNC119BA6NIH7 251 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 OVOL3O00110 214 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 KRT36O76013 467 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 UBL3O95164 117 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 NDUFB2O95178 105 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 STAMBPO95630 424 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 CELA3BP08861 270 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 OR8G3PP0DMU2 310 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 CD79AP11912 226 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 ACVR1BP36896 505 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 PTH2RP49190 550 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 ADAM8P78325 824 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 NKX6-1P78426 367 aaPredicted RBP19.87■□□□□ 0.77
TDP1-216ENST00000556867 CD47Q08722 323 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 SHEQ5VZ18 495 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 ZNF544Q6NX49 715 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 PGM2L1Q6PCE3 622 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 TGIF2LYQ8IUE0 185 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 ARIH2OSQ8N7S6 290 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 FNDC8Q8TC99 324 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 PERPQ96FX8 193 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 LRGUKQ96M69 825 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 GPX7Q96SL4 187 aaPredicted RBP19.87■□□□□ 0.77
TDP1-216ENST00000556867 GPA33Q99795 319 aa19.87■□□□□ 0.77
TDP1-216ENST00000556867 BTBD10Q9BSF8 475 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms