RNA–Protein interactions for RNA: ENST00000556353.1

PRPF39-209, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 687 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-209ENST00000556353 ELMO2Q96JJ3 720 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 CCDC42Q96M95 316 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 OPALINQ96PE5 141 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 PANX2Q96RD6 677 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 CPXM1Q96SM3 734 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 MAPKAP1Q9BPZ7 522 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 INPP5KQ9BT40 448 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 NUP58Q9BVL2 599 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 SLC5A7Q9GZV3 580 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 RAB33BQ9H082 229 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 NEUROG2Q9H2A3 272 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 NEK6Q9HC98 313 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 MRPS30Q9NP92 439 aaKnown RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ABCC13Q9NSE7 274 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 FBXL12Q9NXK8 326 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 VNN3Q9NY84 501 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ARMCX3Q9UH62 379 aaPredicted RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ERVW-1Q9UQF0 538 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 SLC22A14Q9Y267 594 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 SAMHD1Q9Y3Z3 626 aaKnown RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 MAB21L2Q9Y586 359 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 OR51B4Q9Y5P0 310 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 FADS3Q9Y5Q0 445 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 U3KQV3 271 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 TNRC6AQ8NDV7 1962 aaKnown RBP3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ANKRD12Q6UB98 2062 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 PCNX1Q96RV3 2341 aa3.48□□□□□ -1.85
PRPF39-209ENST00000556353 ITPR3Q14573 2671 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 FBN2P35556 2912 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 DOCK10Q96BY6 2186 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 CREBBPQ92793 2442 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 A0A0D9SEW6 157 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 A0A0U1RQS6 177 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 TRABD2BA6NFA1 517 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 CENPBD1B2RD01 187 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 GOLGA8KD6RF30 607 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 WRBO00258 174 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 TNFSF11O14788 317 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 MED7O43513 233 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 NDUFA2O43678 99 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 STX10O60499 249 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 SDC3O75056 442 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 MTX2O75431 263 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 SIX3O95343 332 aaPredicted RBP3.47□□□□□ -1.85
PRPF39-209ENST00000556353 AHSA1O95433 338 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 IGFBP1P08833 259 aaPredicted RBP3.47□□□□□ -1.85
PRPF39-209ENST00000556353 GSTA2P09210 222 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 THRBP10828 461 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 GNSP15586 552 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 ADRA2CP18825 462 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 CALB2P22676 271 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 ACKR3P25106 362 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 OR3A1P47881 315 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 MEOX2P50222 304 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 ARHGDIAP52565 204 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 SLC7A2P52569 658 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 RAB4BP61018 213 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 ACTR3P61158 418 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 YWHAEP62258 255 aaKnown RBP3.47□□□□□ -1.85
PRPF39-209ENST00000556353 SCGB2A2Q13296 93 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 DGCR6Q14129 220 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 ELAVL3Q14576 367 aaKnown RBP3.47□□□□□ -1.85
PRPF39-209ENST00000556353 GSG1Q2KHT4 349 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 C17orf58Q2M2W7 97 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 KLHL40Q2TBA0 621 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 DNAL1Q4LDG9 190 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 HES3Q5TGS1 186 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 ANKRD20A3Q5VUR7 823 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 MFSD7Q6UXD7 560 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 GCNT7Q6ZNI0 430 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 EFL1Q7Z2Z2 1120 aaKnown RBP3.47□□□□□ -1.85
PRPF39-209ENST00000556353 ELMOD2Q8IZ81 293 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 KDM8Q8N371 416 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 SLC25A45Q8N413 288 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 EID2Q8N6I1 236 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 CCDC112Q8NEF3 446 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 SPATA4Q8NEY3 305 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 OR5T1Q8NG75 326 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 OR52J3Q8NH60 311 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 AKR7LQ8NHP1 331 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 GPR148Q8TDV2 347 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 MITD1Q8WV92 249 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 TSEN15Q8WW01 171 aaKnown RBP3.47□□□□□ -1.85
PRPF39-209ENST00000556353 HSFY1Q96LI6 401 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 SERPINB11Q96P15 392 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 TBC1D10AQ9BXI6 508 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 GBA3Q9H227 469 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 TPK1Q9H3S4 243 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 NT5DC2Q9H857 520 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 RMND5AQ9H871 391 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 SGK2Q9HBY8 427 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 NT5MQ9NPB1 228 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 MRPL40Q9NQ50 206 aaKnown RBP3.47□□□□□ -1.85
PRPF39-209ENST00000556353 PIGVQ9NUD9 493 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 ANKMY1Q9P2S6 941 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 MRPS7Q9Y2R9 242 aaKnown RBP3.47□□□□□ -1.85
PRPF39-209ENST00000556353 NF1P21359 2839 aa3.47□□□□□ -1.85
PRPF39-209ENST00000556353 CACNA1DQ01668 2161 aa3.46□□□□□ -1.85
PRPF39-209ENST00000556353 A0A0J9YYE9 177 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms