RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 ERICH5Q6P6B1 374 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 TTC33Q6PID6 262 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 CLEC9AQ6UXN8 241 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 DEF8Q6ZN54 512 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 TMPPEQ6ZT21 453 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 HIST3H2AQ7L7L0 130 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 RRM2BQ7LG56 351 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 NUFIP2Q7Z417 695 aaKnown RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 PIGWQ7Z7B1 504 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 CARM1Q86X55 608 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 PTOV1Q86YD1 416 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 RBM45Q8IUH3 476 aaKnown RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 MICU2Q8IYU8 434 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 KDM8Q8N371 416 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 TMEM99Q8N816 258 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 RELL2Q8NC24 303 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 MBD3L2Q8NHZ7 208 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 ABHD3Q8WU67 409 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 LZICQ8WZA0 190 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 HIST1H2ACQ93077 130 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 RNASE6Q93091 150 aaKnown RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 CPNE4Q96A23 557 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 STARD4Q96DR4 205 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 SLC47A1Q96FL8 570 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 ARL5BQ96KC2 179 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 ZNF583Q96ND8 569 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 ZFP3Q96NJ6 502 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 ZNF300Q96RE9 604 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 CDRT15Q96T59 188 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 HOPXQ9BPY8 73 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 MED18Q9BUE0 208 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 SFXN3Q9BWM7 321 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 MYLK2Q9H1R3 596 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 PIGMQ9H3S5 423 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 TMEM38AQ9H6F2 299 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 KAT8Q9H7Z6 458 aaKnown RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 FANCFQ9NPI8 374 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 EXOSC3Q9NQT5 275 aaKnown RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 ARL8BQ9NVJ2 186 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 CMTM6Q9NX76 183 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 CLCF1Q9UBD9 225 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 UPB1Q9UBR1 384 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 NKX1-2Q9UD57 310 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 TAGLN3Q9UI15 199 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 BAG5Q9UL15 447 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 NOSIPQ9Y314 301 aaKnown RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 ZNF175Q9Y473 711 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 V9GYQ6 96 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 USP9YO00507 2555 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-238ENST00000556288 BSNQ9UPA5 3926 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 LRRK2Q5S007 2527 aa4.12□□□□□ -1.75
ATXN3-238ENST00000556288 HECTD1Q9ULT8 2610 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 AKAP6Q13023 2319 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 SMG1Q96Q15 3661 aaKnown RBP4.11□□□□□ -1.75
ATXN3-238ENST00000556288 A0A1B0GWA3 101 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 A8MXE2 369 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 C11orf98E9PRG8 122 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 C16orf97H3BN30 126 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 MRPL33O75394 65 aaKnown RBP4.11□□□□□ -1.75
ATXN3-238ENST00000556288 STAMBPO95630 424 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 LGI1O95970 557 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 CH25HO95992 272 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 ADAP00813 363 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 SERPINA1P01009 418 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 CRHP06850 196 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 PNMTP11086 282 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 HOXB9P17482 250 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-238ENST00000556288 RPS4Y1P22090 263 aaKnown RBP4.11□□□□□ -1.75
ATXN3-238ENST00000556288 IL32P24001 234 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 FKBP2P26885 142 aaKnown RBP4.11□□□□□ -1.75
ATXN3-238ENST00000556288 ELK4P28324 431 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 KDELR2P33947 212 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 CD79BP40259 229 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 CLK1P49759 484 aaKnown RBP4.11□□□□□ -1.75
ATXN3-238ENST00000556288 MNAT1P51948 309 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 CDH12P55289 794 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 HOXA4Q00056 320 aaPredicted RBP4.11□□□□□ -1.75
ATXN3-238ENST00000556288 PMS2P3Q13401 168 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 PMS2P11Q13670 270 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 STK11Q15831 433 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 ZNF239Q16600 458 aaKnown RBP4.11□□□□□ -1.75
ATXN3-238ENST00000556288 ZSCAN26Q16670 478 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 SLC25A53Q5H9E4 307 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 COQ5Q5HYK3 327 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 C1orf140Q5VVS0 124 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 CARD17Q5XLA6 110 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 ULK3Q6PHR2 472 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 DHRS4L2Q6PKH6 230 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 C16orf89Q6UX73 402 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 CASP12Q6UXS9 341 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 AAED1Q7RTV5 226 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 ARPINQ7Z6K5 226 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 GALNT5Q7Z7M9 940 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 DEFB107AQ8IZN7 70 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 SLC43A2Q8N370 569 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 OR2C3Q8N628 320 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 OR8J3Q8NGG0 315 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 OR6T1Q8NGN1 323 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 PIGXQ8TBF5 258 aa4.11□□□□□ -1.75
ATXN3-238ENST00000556288 BCAS4Q8TDM0 211 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms