RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 ZNF432O94892 652 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 GYPBP06028 91 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 SPI1P17947 270 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 AGTR1P30556 359 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 TIMP3P35625 211 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 SELENOPP49908 381 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 CHN2P52757 468 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 CDH11P55287 796 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 CXCR4P61073 352 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 TMED1Q13445 227 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 APOFQ13790 326 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 SMN1Q16637 294 aaKnown RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 SLC35D3Q5M8T2 416 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 LCN1P1Q5VSP4 162 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 RTL6Q6ICC9 239 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 C3P1Q6ZMU1 363 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 MEPCEQ7L2J0 689 aaKnown RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 FAM214BQ7L5A3 538 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 BCDIN3DQ7Z5W3 292 aaKnown RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 ZGRF1Q86YA3 2104 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 MED12LQ86YW9 2145 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 C20orf196Q8IYI0 205 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 ZNF100Q8IYN0 542 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 GPR137CQ8N3F9 429 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 BBS1Q8NFJ9 593 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 BPIFB6Q8NFQ5 453 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 MBD3L2Q8NHZ7 208 aaPredicted RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 TMEM54Q969K7 222 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 APH1AQ96BI3 265 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 ZFP3Q96NJ6 502 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 NR1H4Q96RI1 486 aaPredicted RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 DDOQ99489 341 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 HCAR1Q9BXC0 346 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 YTHDF1Q9BYJ9 559 aaKnown RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 NMNAT2Q9BZQ4 307 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 RERGLQ9H628 205 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 SRA1Q9HD15 236 aaKnown RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 GLTPQ9NZD2 209 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 WARS2Q9UGM6 360 aaKnown RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 MOKQ9UQ07 419 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 MYRFQ9Y2G1 1151 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 RPL36Q9Y3U8 105 aaKnown RBP9.78□□□□□ -0.84
TMEM260-208ENST00000555905 PCDHGB5Q9Y5G0 923 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 FAM215AQ9Y5M1 114 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 FKBP7Q9Y680 259 aa9.78□□□□□ -0.84
TMEM260-208ENST00000555905 DOCK7Q96N67 2140 aa9.77□□□□□ -0.84
TMEM260-208ENST00000555905 SLC1A7O00341 560 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 KHDRBS3O75525 346 aaKnown RBP9.77□□□□□ -0.85
TMEM260-208ENST00000555905 SMNDC1O75940 238 aaKnown RBP eCLIP9.77□□□□□ -0.85
TMEM260-208ENST00000555905 TNFAIP8O95379 198 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 IL2RAP01589 272 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 CRHP06850 196 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 QDPRP09417 244 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 CCDC159P0C7I6 412 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 CLUP10909 449 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 SLC2A5P22732 501 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 HTR1FP30939 366 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 MTNR1AP48039 350 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 CENPAP49450 140 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 BLVRAP53004 296 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 NUDT6P53370 316 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 HIST3H3Q16695 136 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 UGT2A3Q6UWM9 527 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 ZBTB46Q86UZ6 589 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 WDFY1Q8IWB7 410 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 GCNT2Q8N0V5 402 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 OR6V1Q8N148 313 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 CNEP1R1Q8N9A8 125 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 OR6K6Q8NGW6 343 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 MCHR2Q969V1 340 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 TSSK2Q96PF2 358 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 TEAD3Q99594 435 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 TTYH2Q9BSA4 534 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 ULBP2Q9BZM5 246 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 NUAK2Q9H093 628 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 SLCO5A1Q9H2Y9 848 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 C12orf49Q9H741 205 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 PLCXD1Q9NUJ7 323 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 SH3BGRL2Q9UJC5 107 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 TINAGQ9UJW2 476 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 B9D1Q9UPM9 204 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 TPRKBQ9Y3C4 175 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 SHANK1Q9Y566 2161 aa9.77□□□□□ -0.85
TMEM260-208ENST00000555905 IRGMA1A4Y4 181 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 EFCAB10A6NFE3 127 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 XPNPEP2O43895 674 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 GLCEO94923 617 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 HLA-DQA2P01906 255 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 TMIGD3P0DMS9 266 aaPredicted RBP9.76□□□□□ -0.85
TMEM260-208ENST00000555905 GLI4P10075 376 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 DBTP11182 482 aaKnown RBP9.76□□□□□ -0.85
TMEM260-208ENST00000555905 CTLA4P16410 223 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 CRHBPP24387 322 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 PYCR1P32322 319 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 NTF4P34130 210 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 ATP6V1E1P36543 226 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 GUCA1AP43080 201 aaPredicted RBP9.76□□□□□ -0.85
TMEM260-208ENST00000555905 ZNF84P51523 738 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 SIRPAP78324 504 aa9.76□□□□□ -0.85
TMEM260-208ENST00000555905 GLO1Q04760 184 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms