RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 CDH4P55283 916 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 PRPSAP1Q14558 356 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 INAQ16352 499 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 DPYSL2Q16555 572 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 DMRTC1Q5HYR2 192 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 CEMP1Q6PRD7 247 aaPredicted RBP1.32□□□□□ -2.2
SNX6-204ENST00000555541 OR4S2Q8NH73 311 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 CAMK2N2Q96S95 79 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 MCCC2Q9HCC0 563 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 PIPOXQ9P0Z9 390 aa1.32□□□□□ -2.2
SNX6-204ENST00000555541 HOOK1Q9UJC3 728 aaKnown RBP1.32□□□□□ -2.2
SNX6-204ENST00000555541 TENM1Q9UKZ4 2725 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 ZNF726A6NNF4 738 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 POLR2DO15514 142 aaKnown RBP1.31□□□□□ -2.2
SNX6-204ENST00000555541 MGRN1O60291 552 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 RAMP3O60896 148 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 GCM2O75603 506 aaPredicted RBP1.31□□□□□ -2.2
SNX6-204ENST00000555541 FABP3P05413 133 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 DRD5P21918 477 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 AK4P27144 223 aaPredicted RBP1.31□□□□□ -2.2
SNX6-204ENST00000555541 OPRD1P41143 372 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 PPT1P50897 306 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 IL15RAQ13261 267 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 PIGHQ14442 188 aaPredicted RBP1.31□□□□□ -2.2
SNX6-204ENST00000555541 RABL6Q3YEC7 729 aaPredicted RBP1.31□□□□□ -2.2
SNX6-204ENST00000555541 PRMT9Q6P2P2 845 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 PEX26Q7Z412 305 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 ECHDC2Q86YB7 292 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 LRRC52Q8N7C0 313 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 ZNF557Q8N988 423 aaPredicted RBP1.31□□□□□ -2.2
SNX6-204ENST00000555541 C15orf40Q8WUR7 153 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 CXorf40BQ96DE9 158 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 TVP23CQ96ET8 276 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 ZNF681Q96N22 645 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 SH3GL3Q99963 347 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 FAIM2Q9BWQ8 316 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 LHX5Q9H2C1 402 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 SAMSN1Q9NSI8 373 aaKnown RBP1.31□□□□□ -2.2
SNX6-204ENST00000555541 KIAA1257Q9ULG3 409 aa1.31□□□□□ -2.2
SNX6-204ENST00000555541 A0A0U1RQV1 116 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 DNASE2O00115 360 aaPredicted RBP1.3□□□□□ -2.2
SNX6-204ENST00000555541 PRRG1O14668 218 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 RHOBTB1O94844 696 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 APCSP02743 223 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 CD74P04233 296 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 CAPN1P07384 714 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 GNAO1P09471 354 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 PAX7P23759 505 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 MAPK3P27361 379 aaPredicted RBP1.3□□□□□ -2.2
SNX6-204ENST00000555541 TGFBR1P36897 503 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 CDKN2BP42772 138 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 CXCL12P48061 93 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 FLI1Q01543 452 aaPredicted RBP1.3□□□□□ -2.2
SNX6-204ENST00000555541 SMUG1Q53HV7 270 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 PHYHD1Q5SRE7 291 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 SAXO2Q658L1 398 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 ZFP1Q6P2D0 407 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 TRIM40Q6P9F5 258 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 TMEM179Q6ZVK1 233 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 NUDCD3Q8IVD9 361 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 TMEM123Q8N131 208 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 OR1P1Q8NH06 330 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 COQ8AQ8NI60 647 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 LINC01560Q8TB33 94 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 LKAAEAR1Q8TD35 194 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 C17orf50Q8WW18 174 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 CREB3L1Q96BA8 519 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 MED8Q96G25 268 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 ZSCAN5AQ9BUG6 496 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 PARP12Q9H0J9 701 aaKnown RBP1.3□□□□□ -2.2
SNX6-204ENST00000555541 RAB18Q9NP72 206 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 DDX19AQ9NUU7 478 aaKnown RBP1.3□□□□□ -2.2
SNX6-204ENST00000555541 CHRNA9Q9UGM1 479 aa1.3□□□□□ -2.2
SNX6-204ENST00000555541 TRAV39A0A0B4J263 110 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 A0A0B4J2A0 478 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 HIDE1A8MVS5 230 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 ZNF878C9JN71 531 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 BPY2O14599 106 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 TOM1O60784 492 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 YIF1AO95070 293 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 DIRAS3O95661 229 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 HLA-DQA1P01909 254 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 FGF1P05230 155 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 HSMCR30P0CW71 290 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 SLC2A5P22732 501 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 CCR1P32246 355 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 RGS4P49798 205 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 DGUOKQ16854 277 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 USH1GQ495M9 461 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 CALHM1Q8IU99 346 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 ZNF683Q8IZ20 524 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 ANKFN1Q8N957 763 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 OR8U1Q8NH10 309 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 TRMT10AQ8TBZ6 339 aaKnown RBP1.29□□□□□ -2.2
SNX6-204ENST00000555541 MS4A4EQ96PG1 132 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 UFSP2Q9NUQ7 469 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 BFARQ9NZS9 450 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 SHPKQ9UHJ6 478 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 PNPLA6Q8IY17 1366 aa1.29□□□□□ -2.2
SNX6-204ENST00000555541 RPAP1Q9BWH6 1393 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms