RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 FAM171A2A8MVW0 826 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 J3QRK9 145 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 SLC30A4O14863 429 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 CTLA4P16410 223 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 ALOX5APP20292 161 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 FKBP2P26885 142 aaKnown RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 NANOS3P60323 173 aaKnown RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 RPS15P62841 145 aaKnown RBP7.97□□□□□ -1.13
TDP1-210ENST00000554976 TP53I3Q53FA7 332 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 CCDC157Q569K6 752 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 ACER2Q5QJU3 275 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 AGAP7PQ5VUJ5 663 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 TIGD3Q6B0B8 471 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 TUBA3EQ6PEY2 450 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 MARCH9Q86YJ5 346 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 BEST3Q8N1M1 668 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 DEFB124Q8NES8 71 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 OR2T4Q8NH00 348 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 SGCZQ96LD1 299 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 MNTQ99583 582 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 TMED9Q9BVK6 235 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 ZCCHC4Q9H5U6 513 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 SERINC1Q9NRX5 453 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 IL17BQ9UHF5 180 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 TRAPPC4Q9Y296 219 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 V9GYH0 126 aa7.97□□□□□ -1.13
TDP1-210ENST00000554976 PHF3Q92576 2039 aaKnown RBP7.96□□□□□ -1.13
TDP1-210ENST00000554976 A0A087WV48 116 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 PNMA8CA0A1B0GUJ8 204 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 AQP7P3A6NL99 342 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 TAF4O00268 1085 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 TRAF3IP2O43734 574 aaPredicted RBP7.96□□□□□ -1.13
TDP1-210ENST00000554976 NEURL1O76050 574 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 SNX4O95219 450 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 RENP00797 406 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 CD82P27701 267 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 CRTC2Q53ET0 693 aaPredicted RBP7.96□□□□□ -1.13
TDP1-210ENST00000554976 TRILQ7L0X0 811 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 TXNDC15Q96J42 360 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 KCTD7Q96MP8 289 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 AMELYQ99218 206 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 MROQ9BYG7 248 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 SMURF1Q9HCE7 757 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 HPF1Q9NWY4 346 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 POU2F3Q9UKI9 436 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 HDGFL3Q9Y3E1 203 aa7.96□□□□□ -1.13
TDP1-210ENST00000554976 STMND1H3BQB6 276 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 RAMP1O60894 148 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 TMCC2O75069 709 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 CDRT1O95170 752 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 WNT11O96014 354 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 HLA-DPB1P04440 258 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 SDC2P34741 201 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 THBS2P35442 1172 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 ZNF133P52736 654 aaPredicted RBP7.96□□□□□ -1.14
TDP1-210ENST00000554976 SLC16A1P53985 500 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 HSF1Q00613 529 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 TRAM1Q15629 374 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 ETFDHQ16134 617 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 TRIM16LQ309B1 348 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 FAM205BPQ63HN1 556 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 FDX2Q6P4F2 183 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 GGNQ86UU5 652 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 CADM3Q8N126 398 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 OTOSQ8NHW6 89 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 THAP4Q8WY91 577 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 HPS1Q92902 700 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 ADGRG7Q96K78 797 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 C5orf34Q96MH7 638 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 ATF6BQ99941 703 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 SOSTQ9BQB4 213 aa7.96□□□□□ -1.14
TDP1-210ENST00000554976 CD8B2A6NJW9 211 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 H3BML4 177 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 J3QLW9 94 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 ARHGEF9O43307 516 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 CBR3O75828 277 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 ALX3O95076 343 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 PGA4P0DJD7 388 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 PGA3P0DJD8 388 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 CD8BP10966 210 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 IFNGR1P15260 489 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 ZNF19P17023 458 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 CD40LGP29965 261 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 ATP6V1E1P36543 226 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 MTNR1BP49286 362 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 CENPAP49450 140 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 RORCP51449 518 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 EGR3Q06889 387 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 CEP78Q5JTW2 689 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 TEX30Q5JUR7 227 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 DCAF10Q5QP82 559 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 RPL22L1Q6P5R6 122 aaKnown RBP7.95□□□□□ -1.14
TDP1-210ENST00000554976 TMPRSS12Q86WS5 348 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 KDM8Q8N371 416 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 SLC26A10Q8NG04 563 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 OR1J4Q8NGS1 313 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 OR6K6Q8NGW6 343 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 ABHD4Q8TB40 342 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 NXPE2Q96DL1 559 aa7.95□□□□□ -1.14
TDP1-210ENST00000554976 GNRHR2Q96P88 292 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms