RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 OAFQ86UD1 273 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 MYPOPQ86VE0 399 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 IGFN1Q86VF2 1251 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 ANKS4BQ8N8V4 417 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 CCDC197Q8NCU1 140 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 NOXO1Q8NFA2 376 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 OR13C2Q8NGS9 318 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 ASB10Q8WXI3 467 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 ACOT11Q8WXI4 607 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 HTRA1Q92743 480 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 MCUR1Q96AQ8 359 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 NSMCE2Q96MF7 247 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 ZNF347Q96SE7 839 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 SMR3AQ99954 134 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 RNF121Q9H920 327 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 NMNAT1Q9HAN9 279 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 BARX1Q9HBU1 254 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 DLL4Q9NR61 685 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 MAN2C1Q9NTJ4 1040 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 DCAF13Q9NV06 445 aaKnown RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 STX18Q9P2W9 335 aaKnown RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 CRNNQ9UBG3 495 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 MAGEL2Q9UJ55 1249 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 ADAM21Q9UKJ8 722 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 PMF1-BGLAPU3KQ54 211 aa9.27□□□□□ -0.93
SHMT2-213ENST00000554600 ZNF469Q96JG9 3925 aaPredicted RBP9.27□□□□□ -0.93
SHMT2-213ENST00000554600 A0A087WUU8 490 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 IGHV2OR16-5A0A0B4J2B6 119 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 HTR3EA5X5Y0 456 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 VSTM5A8MXK1 200 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 B2RBV5 119 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 TRMUO75648 421 aaKnown RBP9.26□□□□□ -0.93
SHMT2-213ENST00000554600 UBL3O95164 117 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 IGKV3-15P01624 115 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 IGLV1-44P01699 117 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 PATE4P0C8F1 98 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 OR8G3PP0DMU2 310 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 HSD17B1P14061 328 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 RHCEP18577 417 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 CALCRP30988 508 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 RPL4P36578 427 aaKnown RBP9.26□□□□□ -0.93
SHMT2-213ENST00000554600 CTXN1P60606 82 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 SNRPD2P62316 118 aaKnown RBP9.26□□□□□ -0.93
SHMT2-213ENST00000554600 RAB1AP62820 205 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 RUNX1T1Q06455 604 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 ETFDHQ16134 617 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 C3orf36Q3SXR2 165 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 LRFN4Q6PJG9 635 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 CLEC9AQ6UXN8 241 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 MBOAT2Q6ZWT7 520 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 PIWIL3Q7Z3Z3 882 aaKnown RBP9.26□□□□□ -0.93
SHMT2-213ENST00000554600 SKA3Q8IX90 412 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 RNF113BQ8IZP6 322 aaKnown RBP9.26□□□□□ -0.93
SHMT2-213ENST00000554600 CIARTQ8N365 385 aaPredicted RBP9.26□□□□□ -0.93
SHMT2-213ENST00000554600 SLC22A24Q8N4F4 322 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 FAM86B1Q8N7N1 296 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 FAM169BQ8N8A8 192 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 OR4F15Q8NGB8 312 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 LIPHQ8WWY8 451 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 NSMAFQ92636 917 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 MCHR2Q969V1 340 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 FAM46AQ96IP4 442 aaKnown RBP9.26□□□□□ -0.93
SHMT2-213ENST00000554600 NSL1Q96IY1 281 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 TNFRSF13CQ96RJ3 184 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 SH3GL3Q99963 347 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 GRIP2Q9C0E4 1043 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 NDEL1Q9GZM8 345 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 TXNIPQ9H3M7 391 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 NOX3Q9HBY0 568 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 CA10Q9NS85 328 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 TMEM38BQ9NVV0 291 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 AURKCQ9UQB9 309 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 TMEM5Q9Y2B1 443 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 HIF3AQ9Y2N7 669 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 VPS13CQ709C8 3753 aa9.26□□□□□ -0.93
SHMT2-213ENST00000554600 MALRD1Q5VYJ5 2156 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 ARPC2O15144 300 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 PRSS23O95084 383 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 SLC2A10O95528 541 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 OR4A8P0C604 315 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 NR2C1P13056 603 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 ITGA2P17301 1181 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 SERPINF1P36955 418 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 SLC9A3P48764 834 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 RPL27P61353 136 aaKnown RBP9.25□□□□□ -0.93
SHMT2-213ENST00000554600 VLDLRP98155 873 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 GALK2Q01415 458 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 SPIBQ01892 262 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 SNTB2Q13425 540 aaKnown RBP9.25□□□□□ -0.93
SHMT2-213ENST00000554600 TNK1Q13470 666 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 DAG1Q14118 895 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 RAB39AQ14964 217 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 SGCAQ16586 387 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 C11orf71Q6IPW1 123 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 KRT80Q6KB66 452 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 TMEM53Q6P2H8 277 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 PODNL1Q6PEZ8 512 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 ZNF627Q7L945 461 aa9.25□□□□□ -0.93
SHMT2-213ENST00000554600 SLC16A14Q7RTX9 510 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms