RNA–Protein interactions for RNA: ENST00000547614.5

CHMP1A-203, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-203ENST00000547614 DAP3P51398 398 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 SPATA21Q7Z572 469 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 HIPK1Q86Z02 1210 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 NEU4Q8WWR8 484 aaPredicted RBP16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 PRRC1Q96M27 445 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 EFCAB1Q9HAE3 211 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 INIPQ9NRY2 104 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 TMEM38BQ9NVV0 291 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 STX18Q9P2W9 335 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 A4GNTQ9UNA3 340 aa16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 YLPM1P49750 1951 aaKnown RBP16.11■□□□□ 0.17
CHMP1A-203ENST00000547614 NPIPB13A6NJU9 1138 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 NPIPB4C9JG80 1138 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 ATP8B1O43520 1251 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 SERPINA5P05154 406 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 F13BP05160 661 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 ERCC1P07992 297 aaPredicted RBP16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 GLRXP35754 106 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 AQP2P41181 271 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 CLRN1P58418 232 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 LIPEQ05469 1076 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 KRT80Q6KB66 452 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 SVOPLQ8N434 492 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 ANKS4BQ8N8V4 417 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 ZNF540Q8NDQ6 660 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 ASB10Q8WXI3 467 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 PIMREGQ9BSJ6 248 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 ADAM21Q9UKJ8 722 aa16.1■□□□□ 0.17
CHMP1A-203ENST00000547614 MCIDASD6RGH6 385 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 NDUFAB1O14561 156 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 ACADSP16219 412 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 NR4A2P43354 598 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 ZNF133P52736 654 aaPredicted RBP16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 RPS23P62266 143 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 LSM11P83369 360 aaKnown RBP eCLIP16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 RUNX1T1Q06455 604 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 RAB39AQ14964 217 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 C6orf52Q5T4I8 152 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 C8orf82Q6P1X6 216 aaPredicted RBP16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 HACD2Q6Y1H2 254 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 NOXO1Q8NFA2 376 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 FGFBP3Q8TAT2 258 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 MCHR2Q969V1 340 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 MRPL24Q96A35 216 aaKnown RBP16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 FOXN4Q96NZ1 517 aa16.09■□□□□ 0.17
CHMP1A-203ENST00000547614 KIAA1324LA8MWY0 1029 aaPredicted RBP16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 CXCR6O00574 342 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 TRMUO75648 421 aaKnown RBP16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 IFNW1P05000 195 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 LSP1P33241 339 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 ZNF84P51523 738 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 GALK2Q01415 458 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 LAPTM4AQ15012 233 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 TAF11Q15544 211 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 FXNQ16595 210 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 SLC36A2Q495M3 483 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 C10orf128Q5T292 105 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 ARMC4Q5T2S8 1044 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 CYB5R2Q6BCY4 276 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 ZNF584Q8IVC4 421 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 OFCC1Q8IZS5 231 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 MOSPD2Q8NHP6 518 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 BPIFA2Q96DR5 249 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 ZNF347Q96SE7 839 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 SH3GL3Q99963 347 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 C1orf198Q9H425 327 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 SMURF2Q9HAU4 748 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 DYNLRB1Q9NP97 96 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 HIF3AQ9Y2N7 669 aa16.08■□□□□ 0.16
CHMP1A-203ENST00000547614 SH3PXD2BA1X283 911 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 NME4O00746 187 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 GSTA4O15217 222 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 SYNGR3O43761 229 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 PTHP01270 115 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 PATE4P0C8F1 98 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 NR2C1P13056 603 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 SLC7A2P52569 658 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 ANKDD1AQ495B1 522 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 TMEM53Q6P2H8 277 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 CBLL1Q75N03 491 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 VTCN1Q7Z7D3 282 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 TREML1Q86YW5 311 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 SYT14Q8NB59 555 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 OR4K5Q8NGD3 323 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 GEMIN6Q8WXD5 167 aaKnown RBP16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 FNDC11Q9BVV2 318 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 TXNIPQ9H3M7 391 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 MS4A5Q9H3V2 200 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 TMEM160Q9NX00 188 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 GMPR2Q9P2T1 348 aaKnown RBP16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 SLC7A8Q9UHI5 535 aa16.07■□□□□ 0.16
CHMP1A-203ENST00000547614 SLC22A23A1A5C7 686 aa16.06■□□□□ 0.16
CHMP1A-203ENST00000547614 IGFBP1P08833 259 aaPredicted RBP16.06■□□□□ 0.16
CHMP1A-203ENST00000547614 IGHV4-31P0DP07 118 aa16.06■□□□□ 0.16
CHMP1A-203ENST00000547614 IFI30P13284 250 aa16.06■□□□□ 0.16
CHMP1A-203ENST00000547614 DAOP14920 347 aa16.06■□□□□ 0.16
CHMP1A-203ENST00000547614 GIFP27352 417 aa16.06■□□□□ 0.16
CHMP1A-203ENST00000547614 GSK3BP49841 420 aa16.06■□□□□ 0.16
CHMP1A-203ENST00000547614 GZMKP49863 264 aa16.06■□□□□ 0.16
CHMP1A-203ENST00000547614 TRAM2Q15035 370 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms