RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 ESPL1Q14674 2120 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 F8W036 122 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 K7EQS6 105 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 HCRTR2O43614 444 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 CEACAM5P06731 702 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 NTSR1P30989 418 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 ARRB1P49407 418 aaPredicted RBP13.34□□□□□ -0.27
HOXC11-202ENST00000546378 TAS2R43P59537 309 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 S100A10P60903 97 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 BLOC1S1P78537 153 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 SLC9A3R2Q15599 337 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 RSPO4Q2I0M5 234 aaPredicted RBP13.34□□□□□ -0.27
HOXC11-202ENST00000546378 TMEM44Q2T9K0 475 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 TMEM35AQ53FP2 167 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 PWWP2BQ6NUJ5 590 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 GLDNQ6ZMI3 551 aaPredicted RBP13.34□□□□□ -0.27
HOXC11-202ENST00000546378 C16orf47Q6ZP98 133 aaPredicted RBP13.34□□□□□ -0.27
HOXC11-202ENST00000546378 TPRA1Q86W33 373 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 OR2AK2Q8NG84 335 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 OR51A2Q8NGJ7 313 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 NUDCD2Q8WVJ2 157 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 NUDT22Q9BRQ3 303 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 SLC22A11Q9NSA0 550 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 OBP2AQ9NY56 170 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 CES1P1Q9UKY3 287 aa13.34□□□□□ -0.27
HOXC11-202ENST00000546378 DIDO1Q9BTC0 2240 aaKnown RBP13.34□□□□□ -0.27
HOXC11-202ENST00000546378 H7C2Y5 167 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 SYT5O00445 386 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 RNGTTO60942 597 aaKnown RBP13.33□□□□□ -0.27
HOXC11-202ENST00000546378 FBXO24O75426 580 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 SC5DO75845 299 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 C4BPBP20851 252 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 LCN10Q6JVE6 187 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 ARHGAP11AQ6P4F7 1023 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 GALNT16Q8N428 558 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 CSNK1A1LQ8N752 337 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 RCBTB1Q8NDN9 531 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 TMED6Q8WW62 240 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 RGP1Q92546 391 aaPredicted RBP13.33□□□□□ -0.27
HOXC11-202ENST00000546378 GAS2L1Q99501 681 aaPredicted RBP13.33□□□□□ -0.27
HOXC11-202ENST00000546378 VRK1Q99986 396 aaPredicted RBP13.33□□□□□ -0.27
HOXC11-202ENST00000546378 SARGQ9BW04 601 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 FOXJ3Q9UPW0 622 aa13.33□□□□□ -0.27
HOXC11-202ENST00000546378 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 SEC14L5O43304 696 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 TNFSF12O43508 249 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 LMX1BO60663 402 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 IGKV1D-16P01601 117 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 HIST1H2ABP04908 130 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 POU2F2P09086 479 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 DLSTP36957 453 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 DLX5P56178 289 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 EEF1A1P68104 462 aaKnown RBP13.33□□□□□ -0.28
HOXC11-202ENST00000546378 CXADRP78310 365 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 HIST3H2AQ7L7L0 130 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 TTLQ8NG68 377 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 HIST1H2ACQ93077 130 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 MMABQ96EY8 250 aaPredicted RBP13.33□□□□□ -0.28
HOXC11-202ENST00000546378 TOE1Q96GM8 510 aaKnown RBP13.33□□□□□ -0.28
HOXC11-202ENST00000546378 CMSS1Q9BQ75 279 aaKnown RBP13.33□□□□□ -0.28
HOXC11-202ENST00000546378 ELOVL3Q9HB03 270 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 ABRACLQ9P1F3 81 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 ACSL5Q9ULC5 683 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 CEP250Q9BV73 2442 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 CACNA1EQ15878 2313 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 TRIM77I1YAP6 450 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 OIP5O43482 229 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 IL32P24001 234 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 NFYBP25208 207 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 PRSS3P35030 304 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 RPS11P62280 158 aaKnown RBP eCLIP13.33□□□□□ -0.28
HOXC11-202ENST00000546378 GUCA2BQ16661 112 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 ALG10Q5BKT4 473 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 TAF8Q7Z7C8 310 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 IL17RCQ8NAC3 791 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 COMMD4Q9H0A8 199 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 WDR13Q9H1Z4 485 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 NPFFR2Q9Y5X5 522 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 C2orf16Q68DN1 1984 aa13.33□□□□□ -0.28
HOXC11-202ENST00000546378 GABARAPH6UMI1 98 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 ACOT7O00154 380 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 COL9A1P20849 921 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF273Q14593 569 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF776Q68DI1 518 aaPredicted RBP13.32□□□□□ -0.28
HOXC11-202ENST00000546378 TMEM71Q6P5X7 295 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 ZNF227Q86WZ6 799 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 SEMA6DQ8NFY4 1073 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 MOAP1Q96BY2 351 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 AHCYL2Q96HN2 611 aaKnown RBP13.32□□□□□ -0.28
HOXC11-202ENST00000546378 AIFM2Q9BRQ8 373 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 MENTQ9BUN1 341 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 FRRS1LQ9P0K9 344 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 COLEC10Q9Y6Z7 277 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 CCDC163A0A0D9SF12 145 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 SLC16A7O60669 478 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 AKR7A3O95154 331 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 ATP1B3P54709 279 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 TMEM184AQ6ZMB5 413 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 GPAT4Q86UL3 456 aa13.32□□□□□ -0.28
HOXC11-202ENST00000546378 SMRP1Q8NCR6 262 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms