RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 IDO2Q6ZQW0 420 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 KCTD20Q7Z5Y7 419 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 SLC25A36Q96CQ1 311 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 GAL3ST4Q96RP7 486 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 GINS4Q9BRT9 223 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 FBXL3Q9UKT7 428 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 TRAV18A0A075B6X5 111 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 PRAMEF26H0Y7S4 382 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 TPD52L2O43399 206 aaKnown RBP14.31□□□□□ -0.12
LDLR-204ENST00000545707 CSRP1P21291 193 aaKnown RBP14.31□□□□□ -0.12
LDLR-204ENST00000545707 NFYAP23511 347 aaPredicted RBP14.31□□□□□ -0.12
LDLR-204ENST00000545707 MAPK3P27361 379 aaPredicted RBP14.31□□□□□ -0.12
LDLR-204ENST00000545707 CCKBRP32239 447 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 GFERP55789 205 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 H2BFSP57053 126 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 IKZF1Q13422 519 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 WDR38Q5JTN6 314 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 SPICQ8N5J4 248 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 PTPMT1Q8WUK0 201 aaPredicted RBP14.31□□□□□ -0.12
LDLR-204ENST00000545707 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.31□□□□□ -0.12
LDLR-204ENST00000545707 TSEN15Q8WW01 171 aaKnown RBP14.31□□□□□ -0.12
LDLR-204ENST00000545707 TOE1Q96GM8 510 aaKnown RBP14.31□□□□□ -0.12
LDLR-204ENST00000545707 CHST6Q9GZX3 395 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 GMEB2Q9UKD1 530 aa14.31□□□□□ -0.12
LDLR-204ENST00000545707 OR2M5A3KFT3 312 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 MCRIP1C9JLW8 97 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 ARPC5O15511 151 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 ICOSLGO75144 302 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 NSA2O95478 260 aaKnown RBP14.3□□□□□ -0.12
LDLR-204ENST00000545707 ITGA5P08648 1049 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 OR1D4P47884 311 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 ETFDHQ16134 617 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 FAM160A2Q8N612 972 aaPredicted RBP14.3□□□□□ -0.12
LDLR-204ENST00000545707 DEFB119Q8N690 84 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 EID2Q8N6I1 236 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 GPR148Q8TDV2 347 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 TSLPQ969D9 159 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 INTS14Q96SY0 518 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 COMMD4Q9H0A8 199 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 SOHLH2Q9NX45 425 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 STEAP1Q9UHE8 339 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 SLC6A5Q9Y345 797 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 BRWD1Q9NSI6 2320 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 CFAP54Q96N23 3096 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 TRBV5-7A0A0A0MS05 114 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 XRCC3O43542 346 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 CTAG2O75638 210 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 HIST1H2ABP04908 130 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 GIPP09681 153 aaPredicted RBP14.3□□□□□ -0.12
LDLR-204ENST00000545707 POU3F4P49335 361 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 SLC37A1P57057 533 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 MFSD13AQ14CX5 517 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 MEP1BQ16820 701 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 PXDC1Q5TGL8 231 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 PRAMEF17Q5VTA0 474 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 ALKAL2Q6UX46 152 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 C3P1Q6ZMU1 363 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 HIST3H2AQ7L7L0 130 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 MDGA2Q7Z553 956 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 ZNF227Q86WZ6 799 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 PLPP7Q8NBV4 271 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 OR51S1Q8NGJ8 323 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 RLN3Q8WXF3 142 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 HIST1H2ACQ93077 130 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 MARVELD3Q96A59 401 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 KLHL15Q96M94 604 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 LRRC61Q9BV99 259 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 S1PR5Q9H228 398 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 ELOVL3Q9HB03 270 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 GPN1Q9HCN4 374 aaPredicted RBP14.3□□□□□ -0.12
LDLR-204ENST00000545707 MYEF2Q9P2K5 600 aaKnown RBP14.3□□□□□ -0.12
LDLR-204ENST00000545707 RABL2AQ9UBK7 228 aaPredicted RBP14.3□□□□□ -0.12
LDLR-204ENST00000545707 RABL2BQ9UNT1 228 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 ETV7Q9Y603 341 aa14.3□□□□□ -0.12
LDLR-204ENST00000545707 B8ZZF3 427 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 H7C417 338 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 HCRTR2O43614 444 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 SRPX2O60687 465 aaPredicted RBP14.29□□□□□ -0.12
LDLR-204ENST00000545707 ZNF254O75437 659 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 NUDT14O95848 222 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 PNPP00491 289 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 CPN1P15169 458 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 CD1CP29017 333 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 MRPS10P82664 201 aaKnown RBP14.29□□□□□ -0.12
LDLR-204ENST00000545707 ZNF117Q03924 483 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 MELKQ14680 651 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 EEF1A1P5Q5VTE0 462 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 DCAF12L2Q5VW00 463 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 MARCH3Q86UD3 253 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 ZNF440Q8IYI8 595 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 CXorf58Q96LI9 332 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 TGM7Q96PF1 710 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 CDCA3Q99618 268 aaPredicted RBP14.29□□□□□ -0.12
LDLR-204ENST00000545707 WBP1LQ9NX94 342 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 MTFP1Q9UDX5 166 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 PRODH2Q9UF12 536 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 CD207Q9UJ71 328 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 IGHV5-51A0A0C4DH38 117 aa14.29□□□□□ -0.12
LDLR-204ENST00000545707 GGT3PA6NGU5 568 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms