RNA–Protein interactions for RNA: ENST00000543916.5

CD9-210, Transcript of CD9 molecule, humanhuman

TSL 1 (best)

Gene CD9, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-210ENST00000543916 SHQ1Q6PI26 577 aaKnown RBP13.22□□□□□ -0.29
CD9-210ENST00000543916 DPY19L2P2Q6ZN68 376 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 RASSF6Q6ZTQ3 369 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 P2RY8Q86VZ1 359 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 OR8D4Q8NGM9 314 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 MAGEE2Q8TD90 523 aaPredicted RBP13.22□□□□□ -0.29
CD9-210ENST00000543916 MCHR2Q969V1 340 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 NPAP1Q9NZP6 1156 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 STX18Q9P2W9 335 aaKnown RBP13.22□□□□□ -0.29
CD9-210ENST00000543916 SLC25A15Q9Y619 301 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 CDH10Q9Y6N8 788 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 PKDREJQ9NTG1 2253 aa13.22□□□□□ -0.29
CD9-210ENST00000543916 IGKV1D-43A0A0B4J1Z2 117 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 A6NIZ1 184 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 ANKRD65E5RJM6 399 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 H3BNX3 289 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 SOCS2O14508 198 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 ARHGEF9O43307 516 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 DHHO43323 396 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 ENTPD5O75356 428 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 SOX14O95416 240 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 SLC2A10O95528 541 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 TXNDC12O95881 172 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 FCGR1AP12314 374 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 LOXP28300 417 aaPredicted RBP13.21□□□□□ -0.29
CD9-210ENST00000543916 ZNF133P52736 654 aaPredicted RBP13.21□□□□□ -0.29
CD9-210ENST00000543916 RAP1BP61224 184 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 RAP1AP62834 184 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 TUBA1BP68363 451 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 TUBA4AP68366 448 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 CD47Q08722 323 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 KRR1Q13601 381 aaKnown RBP13.21□□□□□ -0.29
CD9-210ENST00000543916 GPR139Q6DWJ6 353 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 KLHL17Q6TDP4 642 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 CD300LDQ6UXZ3 194 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 TUBA1AQ71U36 451 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 ZNF627Q7L945 461 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 MUCL1Q96DR8 90 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 PIK3IP1Q96FE7 263 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 ERMAPQ96PL5 475 aaPredicted RBP13.21□□□□□ -0.29
CD9-210ENST00000543916 FOXB1Q99853 325 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 ALG12Q9BV10 488 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 IFT27Q9BW83 186 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 RASSF1Q9NS23 344 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 IL20Q9NYY1 176 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 POFUT2Q9Y2G5 429 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 AMDHD2Q9Y303 409 aa13.21□□□□□ -0.29
CD9-210ENST00000543916 FLNBO75369 2602 aaKnown RBP13.2□□□□□ -0.3
CD9-210ENST00000543916 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.2□□□□□ -0.3
CD9-210ENST00000543916 ZNF503-AS2A6NEH8 195 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 CYSRT1A8MQ03 144 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 IMPA2O14732 288 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 HRGP04196 525 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 APEHP13798 732 aaKnown RBP13.2□□□□□ -0.3
CD9-210ENST00000543916 B4GALT1P15291 398 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 GSTM3P21266 225 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 HOXC12P31275 282 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 RPS6KA3P51812 740 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 KRTAP10-9P60411 292 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 CLEC12AQ5QGZ9 265 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 C10orf128Q5T292 105 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 RPL13AP3Q6NVV1 102 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 ZFP1Q6P2D0 407 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 SLC25A47Q6Q0C1 308 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 KLHL24Q6TFL4 600 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 ZNF813Q6ZN06 617 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 PTCHD4Q6ZW05 846 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 TMEM200AQ86VY9 491 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 OR5K1Q8NHB7 308 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 HTRA1Q92743 480 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 NRBF2Q96F24 287 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 HS3ST6Q96QI5 342 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 TBC1D23Q9NUY8 699 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 REV1Q9UBZ9 1251 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 UGT2A1Q9Y4X1 527 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 ALPK2Q86TB3 2170 aa13.2□□□□□ -0.3
CD9-210ENST00000543916 APCP25054 2843 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 ARPC4-TTLL3A0A0A6YYG9 625 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 A0A1W2PPR1 153 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 SLC22A23A1A5C7 686 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 PRSS37A4D1T9 235 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 BHLHE40O14503 412 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 XKRYO14609 159 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 ARPC3O15145 178 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 GOSR1O95249 250 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 CDKN2AP42771 156 aaKnown RBP13.19□□□□□ -0.3
CD9-210ENST00000543916 ZNF83P51522 516 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 COX10Q12887 443 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 BEX5Q5H9J7 111 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 FAHD1Q6P587 224 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 OR52L1Q8NGH7 329 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 PLPPR2Q96GM1 343 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 PKP2Q99959 881 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 BDH2Q9BUT1 245 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 C1QTNF6Q9BXI9 259 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 SEMA6AQ9H2E6 1030 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 SMURF2Q9HAU4 748 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 TMEM38BQ9NVV0 291 aa13.19□□□□□ -0.3
CD9-210ENST00000543916 TACC2O95359 2948 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms