RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 RBM4BQ9BQ04 359 aaKnown RBP5.56□□□□□ -1.52
LTBR-212ENST00000543542 USB1Q9BQ65 265 aaKnown RBP5.56□□□□□ -1.52
LTBR-212ENST00000543542 C9orf16Q9BUW7 83 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 ALG12Q9BV10 488 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 RBM4Q9BWF3 364 aaKnown RBP5.56□□□□□ -1.52
LTBR-212ENST00000543542 KCNN2Q9H2S1 579 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 RIBC2Q9H4K1 309 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 RNF121Q9H920 327 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 SEC61A2Q9H9S3 476 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 SMURF2Q9HAU4 748 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 NTN4Q9HB63 628 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 NGBQ9NPG2 151 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 NRIP3Q9NQ35 241 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 ENOPH1Q9UHY7 261 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 BAIAP2Q9UQB8 552 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 RP1L1Q8IWN7 2480 aaPredicted RBP5.56□□□□□ -1.52
LTBR-212ENST00000543542 NBASA2RRP1 2371 aa5.56□□□□□ -1.52
LTBR-212ENST00000543542 POLEQ07864 2286 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 HIVEP3Q5T1R4 2406 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 UTP20O75691 2785 aaKnown RBP5.55□□□□□ -1.52
LTBR-212ENST00000543542 PRSS37A4D1T9 235 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 RIIAD1A6NNX1 92 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 ZNF99A8MXY4 864 aaPredicted RBP5.55□□□□□ -1.52
LTBR-212ENST00000543542 M0R1B8 84 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 IMPA2O14732 288 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 IDH3BO43837 385 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 SLC16A7O60669 478 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 SLC2A10O95528 541 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 HLA-DQA2P01906 255 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 IGFBP1P08833 259 aaPredicted RBP5.55□□□□□ -1.52
LTBR-212ENST00000543542 EPXP11678 715 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 CD79AP11912 226 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 B4GALT1P15291 398 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 HIST1H1CP16403 213 aaKnown RBP5.55□□□□□ -1.52
LTBR-212ENST00000543542 ZNF26P17031 533 aaPredicted RBP5.55□□□□□ -1.52
LTBR-212ENST00000543542 ZNF3P17036 446 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 COX5AP20674 150 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 PAICSP22234 425 aaKnown RBP5.55□□□□□ -1.52
LTBR-212ENST00000543542 DAPP51397 102 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 CRISP1P54107 249 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 RAD23AP54725 363 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 FXYD6P3P58550 94 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 ELF3P78545 371 aaPredicted RBP5.55□□□□□ -1.52
LTBR-212ENST00000543542 FMODQ06828 376 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 FHL1Q13642 323 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 DAG1Q14118 895 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 GINS1Q14691 196 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 RCN1Q15293 331 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 TRIP10Q15642 601 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 GABRA6Q16445 453 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 SGCAQ16586 387 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 TBRG1Q3YBR2 411 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 HIKESHIQ53FT3 197 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 MESTQ5EB52 335 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 TIMM23BQ5SRD1 257 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 HIST2H2BCQ6DN03 193 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 SLC27A4Q6P1M0 643 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 ANKRD16Q6P6B7 361 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 CD300LDQ6UXZ3 194 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 ZBTB49Q6ZSB9 765 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 LINGO2Q7L985 606 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 ADCK1Q86TW2 530 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 TMEM200AQ86VY9 491 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 P2RY8Q86VZ1 359 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 WDFY1Q8IWB7 410 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 PQLC1Q8N2U9 271 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 C17orf78Q8N4C9 275 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 IQCF1Q8N6M8 205 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 C1orf162Q8NEQ5 155 aaPredicted RBP5.55□□□□□ -1.52
LTBR-212ENST00000543542 SDR9C7Q8NEX9 313 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 OR52E2Q8NGJ4 325 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 OR8D4Q8NGM9 314 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 ZNF519Q8TB69 540 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 NANOS1Q8WY41 292 aaKnown RBP5.55□□□□□ -1.52
LTBR-212ENST00000543542 MCHR2Q969V1 340 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 MARVELD3Q96A59 401 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 PIK3IP1Q96FE7 263 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 DACH2Q96NX9 599 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 SLC38A2Q96QD8 506 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 NMNAT3Q96T66 252 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 FOXB1Q99853 325 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 SPOCK3Q9BQ16 436 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 KCNS3Q9BQ31 491 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 C1QTNF6Q9BXI9 259 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 PRRG3Q9BZD7 231 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 PLA2G12AQ9BZM1 189 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 GABARAPL1Q9H0R8 117 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 OR10A4Q9H209 315 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 SYT4Q9H2B2 425 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 SRA1Q9HD15 236 aaKnown RBP5.55□□□□□ -1.52
LTBR-212ENST00000543542 IL20Q9NYY1 176 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 CRIM1Q9NZV1 1036 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 KLHL21Q9UJP4 597 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 POLR1DQ9Y2S0 133 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 AMDHD2Q9Y303 409 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 MYO18BQ8IUG5 2567 aa5.55□□□□□ -1.52
LTBR-212ENST00000543542 FLNCQ14315 2725 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 COL12A1Q99715 3063 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 SLC22A23A1A5C7 686 aa5.54□□□□□ -1.52
LTBR-212ENST00000543542 OR5H1A6NKK0 313 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms