RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 HGFACQ04756 655 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 FMODQ06828 376 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 DBPQ10586 325 aaPredicted RBP8.46□□□□□ -1.06
YBX3-212ENST00000542002 PPP1R8Q12972 351 aaKnown RBP8.46□□□□□ -1.06
YBX3-212ENST00000542002 BNIP1Q12981 228 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 TOP3AQ13472 1001 aaPredicted RBP8.46□□□□□ -1.06
YBX3-212ENST00000542002 ZBED5Q49AG3 693 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 FGD3Q5JSP0 725 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 LCN8Q6JVE9 175 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 SLC22A25Q6T423 547 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 ZNF813Q6ZN06 617 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 DHFR2Q86XF0 187 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 ZDHHC21Q8IVQ6 265 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 OR4C15Q8NGM1 316 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 ZNF519Q8TB69 540 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 PIGTQ969N2 578 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 SLC38A2Q96QD8 506 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 KCNK17Q96T54 332 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 FOXB1Q99853 325 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 SH3GL3Q99963 347 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 OBP2BQ9NPH6 170 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 VNN3Q9NY84 501 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 PRPF19Q9UMS4 504 aaKnown RBP8.46□□□□□ -1.06
YBX3-212ENST00000542002 EDARQ9UNE0 448 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 SIGLEC7Q9Y286 467 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 UGT2A1Q9Y4X1 527 aa8.46□□□□□ -1.06
YBX3-212ENST00000542002 RAI1Q7Z5J4 1906 aaPredicted RBP8.46□□□□□ -1.06
YBX3-212ENST00000542002 MAP1AP78559 2803 aaPredicted RBP8.45□□□□□ -1.06
YBX3-212ENST00000542002 H7C1C5 153 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 GYG2O15488 501 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 GSC2O15499 205 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 NDUFS7O75251 213 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 GADD45GO95257 159 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 IGHG1P01857 330 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 PAX1P15863 534 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 ITGA2P17301 1181 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 CDAP32320 146 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 ACVR1BP36896 505 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 SLC9A3P48764 834 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 DAP3P51398 398 aaKnown RBP8.45□□□□□ -1.06
YBX3-212ENST00000542002 CDH11P55287 796 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 CLRN1P58418 232 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 LCN6P62502 163 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 NKX6-1P78426 367 aaPredicted RBP8.45□□□□□ -1.06
YBX3-212ENST00000542002 SPIBQ01892 262 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 NAAAQ02083 359 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 ETFDHQ16134 617 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 MST1LQ2TV78 715 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 C1QTNF12Q5T7M4 302 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 ZNF770Q6IQ21 691 aaPredicted RBP8.45□□□□□ -1.06
YBX3-212ENST00000542002 SLC25A47Q6Q0C1 308 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 RRM2BQ7LG56 351 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 FAM122BQ7Z309 247 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 ZNF584Q8IVC4 421 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 CDK20Q8IZL9 346 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 SLC22A24Q8N4F4 322 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 FAM169BQ8N8A8 192 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 NOXO1Q8NFA2 376 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 FBXW5Q969U6 566 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 GTPBP3Q969Y2 492 aaKnown RBP8.45□□□□□ -1.06
YBX3-212ENST00000542002 MCUR1Q96AQ8 359 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 CCDC124Q96CT7 223 aaKnown RBP8.45□□□□□ -1.06
YBX3-212ENST00000542002 ASB9Q96DX5 294 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 PERPQ96FX8 193 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 RADILQ96JH8 1075 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 Q96M85 177 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 BTBD10Q9BSF8 475 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 KATNB1Q9BVA0 655 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 CADM1Q9BY67 442 aaKnown RBP8.45□□□□□ -1.06
YBX3-212ENST00000542002 B3GAT2Q9NPZ5 323 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 ZNF701Q9NV72 531 aaPredicted RBP8.45□□□□□ -1.06
YBX3-212ENST00000542002 TMEM38BQ9NVV0 291 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 MGAT4BQ9UQ53 548 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 ANKRD17O75179 2603 aaKnown RBP8.45□□□□□ -1.06
YBX3-212ENST00000542002 HIVEP1P15822 2718 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 ROS1P08922 2347 aa8.45□□□□□ -1.06
YBX3-212ENST00000542002 UNC119BA6NIH7 251 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 CENPBD1B2RD01 187 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 SMPD2O60906 423 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 GASTP01350 101 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 CD14P08571 375 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 CD79AP11912 226 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 ZNF14P17017 642 aaPredicted RBP8.44□□□□□ -1.06
YBX3-212ENST00000542002 TTKP33981 857 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 ARR3P36575 388 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 CDKN1AP38936 164 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 CAPZA2P47755 286 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 GIPRP48546 466 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 PTH2RP49190 550 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 IDH3GP51553 393 aaPredicted RBP8.44□□□□□ -1.06
YBX3-212ENST00000542002 RAB1AP62820 205 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 TRAP1Q12931 704 aaKnown RBP8.44□□□□□ -1.06
YBX3-212ENST00000542002 C3orf36Q3SXR2 165 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 ANKDD1AQ495B1 522 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 C10orf128Q5T292 105 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 C11orf71Q6IPW1 123 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 C1orf94Q6P1W5 598 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 PGBD2Q6P3X8 592 aa8.44□□□□□ -1.06
YBX3-212ENST00000542002 DTX2Q86UW9 622 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms