RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 TMIGD3P0DMS9 266 aaPredicted RBP8.26□□□□□ -1.09
DDX55-208ENST00000541259 CLUP10909 449 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 GABRB1P18505 474 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 HSPA13P48723 471 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 PCYT1AP49585 367 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 FMODQ06828 376 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 TMEM201Q5SNT2 666 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 SAMD5Q5TGI4 173 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 VWA1Q6PCB0 445 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 FAM214BQ7L5A3 538 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 LINGO2Q7L985 606 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 BTLAQ7Z6A9 289 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 JAZF1Q86VZ6 243 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 CPOQ8IVL8 374 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 CNEP1R1Q8N9A8 125 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 GALNT11Q8NCW6 608 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 BBS1Q8NFJ9 593 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 PTP4A1Q93096 173 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 TMEM54Q969K7 222 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 TMEM45BQ96B21 275 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 OTULINQ96BN8 352 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 SLC25A44Q96H78 314 aaPredicted RBP8.26□□□□□ -1.09
DDX55-208ENST00000541259 ADAD1Q96M93 576 aaKnown RBP8.26□□□□□ -1.09
DDX55-208ENST00000541259 TSSK2Q96PF2 358 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 SLC38A2Q96QD8 506 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 DMRTA2Q96SC8 542 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 MRPL13Q9BYD1 178 aaKnown RBP8.26□□□□□ -1.09
DDX55-208ENST00000541259 GP6Q9HCN6 339 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 SRA1Q9HD15 236 aaKnown RBP8.26□□□□□ -1.09
DDX55-208ENST00000541259 HINT3Q9NQE9 182 aaKnown RBP8.26□□□□□ -1.09
DDX55-208ENST00000541259 GLRX2Q9NS18 164 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 EMC3Q9P0I2 261 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 Q9UFV3 132 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 KLHL21Q9UJP4 597 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 RAB26Q9ULW5 256 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 MEMO1Q9Y316 297 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 LRRC42Q9Y546 428 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 RTTNQ86VV8 2226 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 ZNF462Q96JM2 2506 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 A6NIZ1 184 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 RIIAD1A6NNX1 92 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 FAM171A2A8MVW0 826 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 E9PLN8 166 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 M0R3G1 203 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 CCL21O00585 134 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 XKRYO14609 159 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 SLC43A1O75387 559 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 MRPL33O75394 65 aaKnown RBP8.25□□□□□ -1.09
DDX55-208ENST00000541259 WBP4O75554 376 aaKnown RBP8.25□□□□□ -1.09
DDX55-208ENST00000541259 TNFSF13O75888 250 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 GPANK1O95872 356 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 IFNGP01579 166 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 IGHG1P01857 330 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 GYPBP06028 91 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 STSP08842 583 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 MYF6P23409 242 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 FOXG1P55316 489 aaPredicted RBP8.25□□□□□ -1.09
DDX55-208ENST00000541259 PER3P56645 1201 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 CLRN1P58418 232 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 RAP1BP61224 184 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 ISL1P61371 349 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 RAP1AP62834 184 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 IL5RAQ01344 420 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 CD47Q08722 323 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 MAD2L1BPQ15013 274 aaPredicted RBP8.25□□□□□ -1.09
DDX55-208ENST00000541259 ETFDHQ16134 617 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 HIST3H3Q16695 136 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 TSPO2Q5TGU0 170 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 FAM205BPQ63HN1 556 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 OR2A2Q6IF42 318 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 LAIR2Q6ISS4 152 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 PLBD1Q6P4A8 553 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 LRFN4Q6PJG9 635 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 CXXC5Q7LFL8 322 aaKnown RBP8.25□□□□□ -1.09
DDX55-208ENST00000541259 C20orf196Q8IYI0 205 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 C8orf59Q8N0T1 100 aaPredicted RBP8.25□□□□□ -1.09
DDX55-208ENST00000541259 NOXO1Q8NFA2 376 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 OR51L1Q8NGJ5 315 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 OR9Q1Q8NGQ5 310 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 OR6N1Q8NGY5 312 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 RHOXF1Q8NHV9 184 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 CNIH3Q8TBE1 160 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 TMEM163Q8TC26 289 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 APH1BQ8WW43 257 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 ZNF566Q969W8 418 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 NMD3Q96D46 503 aaKnown RBP8.25□□□□□ -1.09
DDX55-208ENST00000541259 STARD4Q96DR4 205 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 PLEKHA8Q96JA3 519 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 CNBD2Q96M20 576 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 FOXN4Q96NZ1 517 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 APOL4Q9BPW4 351 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 VKORC1Q9BQB6 163 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 TEX12Q9BXU0 123 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 ANKRD60Q9BZ19 345 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 NMNAT2Q9BZQ4 307 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 NUAK2Q9H093 628 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 SYT4Q9H2B2 425 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 BRD7Q9NPI1 651 aa8.25□□□□□ -1.09
DDX55-208ENST00000541259 RPRD1BQ9NQG5 326 aaKnown RBP8.25□□□□□ -1.09
DDX55-208ENST00000541259 SLC7A10Q9NS82 523 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms