RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 TRAF4Q9BUZ4 470 aaPredicted RBP11.41□□□□□ -0.58
LTBR-208ENST00000541005 TMUB1Q9BVT8 246 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 DENND2DQ9H6A0 471 aaPredicted RBP11.41□□□□□ -0.58
LTBR-208ENST00000541005 SMURF2Q9HAU4 748 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 TMEM38BQ9NVV0 291 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 TAS2R1Q9NYW7 299 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 ZNF224Q9NZL3 707 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 LAMP3Q9UQV4 416 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 V9GYQ6 96 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 CR1P17927 2039 aa11.41□□□□□ -0.58
LTBR-208ENST00000541005 ZNF469Q96JG9 3925 aaPredicted RBP11.41□□□□□ -0.58
LTBR-208ENST00000541005 TCRBV5S2A0A599 114 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 SH3PXD2BA1X283 911 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 ATP6V1G2-DDX39BF2Z307 99 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 ARHGEF9O43307 516 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 DHHO43323 396 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 DIRAS1O95057 198 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 CD8AP01732 235 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 FABP3P05413 133 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 NR2C1P13056 603 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 TTKP33981 857 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 MAGEA2P43356 314 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 OMPP47874 163 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 CLRN1P58418 232 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 RPL27P61353 136 aaKnown RBP11.4□□□□□ -0.58
LTBR-208ENST00000541005 NKX6-1P78426 367 aaPredicted RBP11.4□□□□□ -0.58
LTBR-208ENST00000541005 NAAAQ02083 359 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 TRIM25Q14258 630 aaKnown RBP11.4□□□□□ -0.58
LTBR-208ENST00000541005 SEC23BQ15437 767 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 Q5PR19 223 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 C11orf71Q6IPW1 123 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 RRM2BQ7LG56 351 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 MDP1Q86V88 176 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 MEX3DQ86XN8 651 aaKnown RBP11.4□□□□□ -0.58
LTBR-208ENST00000541005 OR4K5Q8NGD3 323 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 OR51A7Q8NH64 312 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 ZNF519Q8TB69 540 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 NANOS1Q8WY41 292 aaKnown RBP11.4□□□□□ -0.58
LTBR-208ENST00000541005 MCHR2Q969V1 340 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 ZNF75AQ96N20 296 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 ZNF347Q96SE7 839 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 GPX7Q96SL4 187 aaPredicted RBP11.4□□□□□ -0.58
LTBR-208ENST00000541005 ALG12Q9BV10 488 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 MAGIXQ9H6Y5 334 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 KRCC1Q9NPI7 259 aaPredicted RBP11.4□□□□□ -0.58
LTBR-208ENST00000541005 POU2F3Q9UKI9 436 aa11.4□□□□□ -0.58
LTBR-208ENST00000541005 YLPM1P49750 1951 aaKnown RBP11.39□□□□□ -0.59
LTBR-208ENST00000541005 C2CD3Q4AC94 2353 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 A6NIZ1 184 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 MGRN1O60291 552 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 UBL3O95164 117 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 HLA-HP01893 362 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 CRYAAP02489 173 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 CELA3BP08861 270 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 QDPRP09417 244 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 ZNF26P17031 533 aaPredicted RBP11.39□□□□□ -0.59
LTBR-208ENST00000541005 IDH3GP51553 393 aaPredicted RBP11.39□□□□□ -0.59
LTBR-208ENST00000541005 CTXN1P60606 82 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 RAP1BP61224 184 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 RAP1AP62834 184 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 SPIBQ01892 262 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 GSG1Q2KHT4 349 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 ZBED5Q49AG3 693 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 AGAP6Q5VW22 663 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 CSPG4Q6UVK1 2322 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 CYP2R1Q6VVX0 501 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 DPPA2Q7Z7J5 298 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 MYPOPQ86VE0 399 aaPredicted RBP11.39□□□□□ -0.59
LTBR-208ENST00000541005 DHFR2Q86XF0 187 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 WFDC11Q8NEX6 87 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 IL17RDQ8NFM7 739 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 FNDC8Q8TC99 324 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 HDAC2Q92769 488 aaKnown RBP11.39□□□□□ -0.59
LTBR-208ENST00000541005 ASB9Q96DX5 294 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 PERPQ96FX8 193 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 FAM46AQ96IP4 442 aaKnown RBP11.39□□□□□ -0.59
LTBR-208ENST00000541005 TSPAN32Q96QS1 320 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 TNFRSF13CQ96RJ3 184 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 NDEL1Q9GZM8 345 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 SEC61A2Q9H9S3 476 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 NOX3Q9HBY0 568 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 DLL4Q9NR61 685 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 CBLN4Q9NTU7 201 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 FBXL3Q9UKT7 428 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 MOKQ9UQ07 419 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 SIGLEC7Q9Y286 467 aa11.39□□□□□ -0.59
LTBR-208ENST00000541005 PTP4A3O75365 173 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 PDE5AO76074 875 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 UBOX5O94941 541 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 GADD45GO95257 159 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 CD14P08571 375 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 OR8G3PP0DMU2 310 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 ZNF14P17017 642 aaPredicted RBP11.38□□□□□ -0.59
LTBR-208ENST00000541005 ZNF84P51523 738 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 MS4A2Q01362 244 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 TOP3AQ13472 1001 aaPredicted RBP11.38□□□□□ -0.59
LTBR-208ENST00000541005 FAM122BQ7Z309 247 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 IGFN1Q86VF2 1251 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 ZDHHC21Q8IVQ6 265 aa11.38□□□□□ -0.59
LTBR-208ENST00000541005 FBXL14Q8N1E6 418 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms