RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 STARD4Q96DR4 205 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 MUS81Q96NY9 551 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 SIGLEC11Q96RL6 698 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 SFXN3Q9BWM7 321 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 PRRG3Q9BZD7 231 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 Q9UFV3 132 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 GMPPBQ9Y5P6 360 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 FKBP7Q9Y680 259 aa9.32□□□□□ -0.92
VPS33A-204ENST00000540669 DIDO1Q9BTC0 2240 aaKnown RBP9.32□□□□□ -0.92
VPS33A-204ENST00000540669 TRGV8A0A0C4DH27 118 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 OR6C65A6NJZ3 312 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 PRODHO43272 600 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 IGHG1P01857 330 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 CTLA4P16410 223 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 AHCYP23526 432 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 POU1F1P28069 291 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 ACVR1BP36896 505 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 SLC15A1P46059 708 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 UQCRFS1P47985 274 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 CDC42P60953 191 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 ADORA2A-AS1P86434 159 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 ITGADQ13349 1161 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 TOP3AQ13472 1001 aaPredicted RBP9.31□□□□□ -0.92
VPS33A-204ENST00000540669 GGTLC2Q14390 218 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 TSPO2Q5TGU0 170 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 NXNL2Q5VZ03 156 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 GTF2IRD2BQ6EKJ0 949 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 VWA1Q6PCB0 445 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 LRFN4Q6PJG9 635 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 GTF2IRD2Q86UP8 949 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 GCNT2Q8N0V5 402 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 GABRG1Q8N1C3 465 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 DEPDC4Q8N2C3 294 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 RELL2Q8NC24 303 aaPredicted RBP9.31□□□□□ -0.92
VPS33A-204ENST00000540669 SDR9C7Q8NEX9 313 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 ZNRF4Q8WWF5 429 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 PTP4A1Q93096 173 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 UBE2FQ969M7 185 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 ZNF566Q969W8 418 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 NMNAT3Q96T66 252 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 EMC6Q9BV81 110 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 SYT4Q9H2B2 425 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 SLCO5A1Q9H2Y9 848 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 NELFAQ9H3P2 528 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 PLSCR4Q9NRQ2 329 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 GRHPRQ9UBQ7 328 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 ZNF629Q9UEG4 869 aaPredicted RBP9.31□□□□□ -0.92
VPS33A-204ENST00000540669 CLEC4AQ9UMR7 237 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 OSGIN2Q9Y236 505 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 PCDHGB5Q9Y5G0 923 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 MYO7BQ6PIF6 2116 aa9.31□□□□□ -0.92
VPS33A-204ENST00000540669 GCN1Q92616 2671 aaKnown RBP9.3□□□□□ -0.92
VPS33A-204ENST00000540669 CLEC18AA5D8T8 446 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 RIIAD1A6NNX1 92 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 H7C1C5 153 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 MPZL2O60487 215 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 UPK3AO75631 287 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 IFNGP01579 166 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 TMIGD3P0DMS9 266 aaPredicted RBP9.3□□□□□ -0.92
VPS33A-204ENST00000540669 NR2C1P13056 603 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 ZNF3P17036 446 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 SPI1P17947 270 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 CTSSP25774 331 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 LCN6P62502 163 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 IL1RL1Q01638 556 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 FMODQ06828 376 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 LGALS3BPQ08380 585 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 TMED1Q13445 227 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 C1DQ13901 141 aaKnown RBP9.3□□□□□ -0.92
VPS33A-204ENST00000540669 KCNMB1Q16558 191 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 PCK2Q16822 640 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 FBXL19-AS1Q494R0 122 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 NRN1LQ496H8 165 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 C4orf17Q53FE4 359 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 SLC35F1Q5T1Q4 408 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 LEG1Q6P5S2 330 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 CLEC18BQ6UXF7 455 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 CASP12Q6UXS9 341 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 C3P1Q6ZMU1 363 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 NCCRP1Q6ZVX7 275 aaPredicted RBP9.3□□□□□ -0.92
VPS33A-204ENST00000540669 CHMP1BQ7LBR1 199 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 AAED1Q7RTV5 226 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 BTLAQ7Z6A9 289 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 OR6V1Q8N148 313 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 TCEANCQ8N8B7 351 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 CYB561A3Q8NBI2 242 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 CLEC18CQ8NCF0 446 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 SETD9Q8NE22 299 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 ZNF555Q8NEP9 628 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 BBS1Q8NFJ9 593 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 OR52E2Q8NGJ4 325 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 OR4K13Q8NH42 304 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 SSC4DQ8WTU2 575 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 NABP1Q96AH0 204 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 INTS12Q96CB8 462 aaKnown RBP9.3□□□□□ -0.92
VPS33A-204ENST00000540669 SLC38A2Q96QD8 506 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 APOL4Q9BPW4 351 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 SLC7A10Q9NS82 523 aa9.3□□□□□ -0.92
VPS33A-204ENST00000540669 PLCXD1Q9NUJ7 323 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms