RNA–Protein interactions for RNA: ENST00000539413.1

CIT-210, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-210ENST00000539413 TRAV27A0A087WT01 109 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 IGHV2OR16-5A0A0B4J2B6 119 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 NPIPB13A6NJU9 1138 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 EFCAB9A8MZ26 197 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 NPIPB4C9JG80 1138 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 SSX4O60224 188 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 DIRAS1O95057 198 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 GPR4P46093 362 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 GIPRP48546 466 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 PTDSS1P48651 473 aaKnown RBP13.58□□□□□ -0.24
CIT-210ENST00000539413 RIPPLY3P57055 190 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 RAB1AP62820 205 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 VLDLRP98155 873 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 TOP3AQ13472 1001 aaPredicted RBP13.58□□□□□ -0.24
CIT-210ENST00000539413 C16orf89Q6UX73 402 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 Q71RC1 249 aaPredicted RBP13.58□□□□□ -0.24
CIT-210ENST00000539413 HDDC2Q7Z4H3 204 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 DEFB107AQ8IZN7 70 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 SLC22A24Q8N4F4 322 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 LRRC75AQ8NAA5 344 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 OR4F15Q8NGB8 312 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 OR13C2Q8NGS9 318 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 SLC7A13Q8TCU3 470 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 NANOS1Q8WY41 292 aaKnown RBP13.58□□□□□ -0.24
CIT-210ENST00000539413 HDAC2Q92769 488 aaKnown RBP13.58□□□□□ -0.24
CIT-210ENST00000539413 TNFRSF13CQ96RJ3 184 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 SH3GL3Q99963 347 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 TXNIPQ9H3M7 391 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 ANKRD19PQ9H560 264 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 BARX1Q9HBU1 254 aaPredicted RBP13.58□□□□□ -0.24
CIT-210ENST00000539413 MAGEL2Q9UJ55 1249 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 ROS1P08922 2347 aa13.58□□□□□ -0.24
CIT-210ENST00000539413 CENPBD1B2RD01 187 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 H7C417 338 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 CDC42EP2O14613 210 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 UBL3O95164 117 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 FAM107AO95990 144 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 H1F0P07305 194 aaKnown RBP13.57□□□□□ -0.24
CIT-210ENST00000539413 OR8G3PP0DMU2 310 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 ZNF14P17017 642 aaPredicted RBP13.57□□□□□ -0.24
CIT-210ENST00000539413 RHCEP18577 417 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 SERPINF1P36955 418 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 CTXN1P60606 82 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 CHRNB3Q05901 458 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 KRT72Q14CN4 511 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 ADIPOQQ15848 244 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 SWI5Q1ZZU3 235 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 GKAP1Q5VSY0 366 aaPredicted RBP13.57□□□□□ -0.24
CIT-210ENST00000539413 PODNL1Q6PEZ8 512 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 CLEC9AQ6UXN8 241 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 DNM1P46Q6ZS02 220 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 TMPRSS11FQ6ZWK6 438 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 OAFQ86UD1 273 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 CDK20Q8IZL9 346 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 NUP37Q8NFH4 326 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 IL17RDQ8NFM7 739 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 PYURFQ96I23 114 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 NDE1Q9NXR1 346 aa13.57□□□□□ -0.24
CIT-210ENST00000539413 ZNF346Q9UL40 294 aaKnown RBP13.57□□□□□ -0.24
CIT-210ENST00000539413 FAM32AQ9Y421 112 aaKnown RBP13.57□□□□□ -0.24
CIT-210ENST00000539413 CADP27708 2225 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 IGKV1D-43A0A0B4J1Z2 117 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 A0A1W2PRQ8 180 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 RNF223E7ERA6 249 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 ARPC2O15144 300 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 SLC2A10O95528 541 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 RAB36O95755 333 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 LY6G6DO95868 133 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 IGHMP01871 453 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 SEMG1P04279 462 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 OR4A8P0C604 315 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 BMP4P12644 408 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 THBS4P35443 961 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 SLC9A3P48764 834 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 ZNF84P51523 738 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 ZNF133P52736 654 aaPredicted RBP13.56□□□□□ -0.24
CIT-210ENST00000539413 NUDT6P53370 316 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 RPL27P61353 136 aaKnown RBP13.56□□□□□ -0.24
CIT-210ENST00000539413 FMODQ06828 376 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 DGCR6Q14129 220 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 RAB39AQ14964 217 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 RAB35Q15286 201 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 IQCCQ4KMZ1 466 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 FGD3Q5JSP0 725 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 C10orf128Q5T292 105 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 KRT80Q6KB66 452 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 RRM2BQ7LG56 351 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 CLDN22Q8N7P3 220 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 CCDC197Q8NCU1 140 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 OR4K5Q8NGD3 323 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 NMD3Q96D46 503 aaKnown RBP13.56□□□□□ -0.24
CIT-210ENST00000539413 FAM46AQ96IP4 442 aaKnown RBP13.56□□□□□ -0.24
CIT-210ENST00000539413 NSMCE2Q96MF7 247 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 TSPAN32Q96QS1 320 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 KCNK17Q96T54 332 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 STX18Q9P2W9 335 aaKnown RBP13.56□□□□□ -0.24
CIT-210ENST00000539413 PMF1-BGLAPU3KQ54 211 aa13.56□□□□□ -0.24
CIT-210ENST00000539413 FLNAP21333 2647 aaKnown RBP13.56□□□□□ -0.24
CIT-210ENST00000539413 TRBV4-1A0A0J9YWV2 114 aa13.55□□□□□ -0.24
CIT-210ENST00000539413 B2RBV5 119 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms