RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 RAB36O95755 333 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 PGA4P0DJD7 388 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 PGA3P0DJD8 388 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 ZNF16P17020 682 aaPredicted RBP12.93□□□□□ -0.34
RAB40B-202ENST00000538809 FUT1P19526 365 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 PPOXP50336 477 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 CLRN1P58418 232 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 PSME3P61289 254 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 RUNX1T1Q06455 604 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 LOXL1Q08397 574 aaPredicted RBP12.93□□□□□ -0.34
RAB40B-202ENST00000538809 ST3GAL3Q11203 375 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 GGTLC2Q14390 218 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 RAB39AQ14964 217 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 MSMPQ1L6U9 139 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 OFCC1Q8IZS5 231 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 ZCCHC24Q8N2G6 241 aaKnown RBP12.93□□□□□ -0.34
RAB40B-202ENST00000538809 NOXO1Q8NFA2 376 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 MOSPD2Q8NHP6 518 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 LZICQ8WZA0 190 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 SLC25A44Q96H78 314 aaPredicted RBP12.93□□□□□ -0.34
RAB40B-202ENST00000538809 ZNF347Q96SE7 839 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 PIMREGQ9BSJ6 248 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 FAM107BQ9H098 131 aa12.93□□□□□ -0.34
RAB40B-202ENST00000538809 NSRP1Q9H0G5 558 aaKnown RBP12.93□□□□□ -0.34
RAB40B-202ENST00000538809 TMEM129A0AVI4 362 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 J3KTA2 159 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 NDUFAB1O14561 156 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 DHHO43323 396 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 UBL3O95164 117 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 BCL10O95999 233 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 IGHG1P01857 330 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 QDPRP09417 244 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 AQP2P41181 271 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 YAP1P46937 504 aaKnown RBP12.92□□□□□ -0.34
RAB40B-202ENST00000538809 RAB1AP62820 205 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 HIST3H3Q16695 136 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 IFI44LQ53G44 452 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 C6orf52Q5T4I8 152 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 LRFN4Q6PJG9 635 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 PIGWQ7Z7B1 504 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 SKA3Q8IX90 412 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 SLC22A24Q8N4F4 322 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 SYT14Q8NB59 555 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 GEMIN6Q8WXD5 167 aaKnown RBP12.92□□□□□ -0.34
RAB40B-202ENST00000538809 ASB10Q8WXI3 467 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 HSH2DQ96JZ2 352 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 SH3GL3Q99963 347 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 MRPL13Q9BYD1 178 aaKnown RBP12.92□□□□□ -0.34
RAB40B-202ENST00000538809 DYNLRB1Q9NP97 96 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 TMEM38BQ9NVV0 291 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 MED31Q9Y3C7 131 aa12.92□□□□□ -0.34
RAB40B-202ENST00000538809 A0A1W2PRG6 482 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 HTR3EA5X5Y0 456 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 NPIPB13A6NJU9 1138 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 A8MV72 311 aaPredicted RBP12.91□□□□□ -0.34
RAB40B-202ENST00000538809 VWC2LB2RUY7 222 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 NPIPB4C9JG80 1138 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 SERPINA1P01009 418 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 IFNW1P05000 195 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 IGHV4-31P0DP07 118 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 ZNF35P13682 527 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 NCK1P16333 377 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 USF1P22415 310 aaPredicted RBP12.91□□□□□ -0.34
RAB40B-202ENST00000538809 NR4A1P22736 598 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 ZNF133P52736 654 aaPredicted RBP12.91□□□□□ -0.34
RAB40B-202ENST00000538809 GNGT1P63211 74 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 VLDLRP98155 873 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 FHL1Q13642 323 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 FXNQ16595 210 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 PIWIL3Q7Z3Z3 882 aaKnown RBP12.91□□□□□ -0.34
RAB40B-202ENST00000538809 CPLX4Q7Z7G2 160 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 MEX3DQ86XN8 651 aaKnown RBP12.91□□□□□ -0.34
RAB40B-202ENST00000538809 IL17RDQ8NFM7 739 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 OR4K5Q8NGD3 323 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 DOK1Q99704 481 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 KCTD14Q9BQ13 255 aaPredicted RBP12.91□□□□□ -0.34
RAB40B-202ENST00000538809 MRPL37Q9BZE1 423 aaKnown RBP12.91□□□□□ -0.34
RAB40B-202ENST00000538809 RAB1BQ9H0U4 201 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 TPK1Q9H3S4 243 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 SPAG4Q9NPE6 437 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 INIPQ9NRY2 104 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 RHCGQ9UBD6 479 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 FZR1Q9UM11 496 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 HIF3AQ9Y2N7 669 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 CMAHPQ9Y471 501 aa12.91□□□□□ -0.34
RAB40B-202ENST00000538809 DNHD1Q96M86 4753 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 CUBNO60494 3623 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 CENPBD1B2RD01 187 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 GSTA4O15217 222 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 TRMUO75648 421 aaKnown RBP12.9□□□□□ -0.34
RAB40B-202ENST00000538809 ZNF682O95780 498 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 IGFBP1P08833 259 aaPredicted RBP12.9□□□□□ -0.34
RAB40B-202ENST00000538809 OR8G3PP0DMU2 310 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 IFI30P13284 250 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 MAKP20794 623 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 NR4A2P43354 598 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 TOP3AQ13472 1001 aaPredicted RBP12.9□□□□□ -0.34
RAB40B-202ENST00000538809 ARMC4Q5T2S8 1044 aa12.9□□□□□ -0.34
RAB40B-202ENST00000538809 GKAP1Q5VSY0 366 aaPredicted RBP12.9□□□□□ -0.34
RAB40B-202ENST00000538809 ZNF584Q8IVC4 421 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms