RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 LYNP07948 512 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 QDPRP09417 244 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CCDC159P0C7I6 412 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 EDN3P14138 238 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SPI1P17947 270 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GSTT1P30711 240 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 HTR1FP30939 366 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC25A1P53007 311 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 POU4F2Q12837 409 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TMED1Q13445 227 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SGCAQ16586 387 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PRR30Q53SZ7 412 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC35D3Q5M8T2 416 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SLC25A30Q5SVS4 291 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ARMC4Q5T2S8 1044 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ABLIM2Q6H8Q1 611 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PLXDC2Q6UX71 529 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RPTNQ6XPR3 784 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ABHD12BQ7Z5M8 362 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CCDC71Q8IV32 467 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SVOPQ8N4V2 548 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NPEPL1Q8NDH3 523 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NOXO1Q8NFA2 376 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 BBS1Q8NFJ9 593 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR51G2Q8NGK0 314 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF519Q8TB69 540 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RNF128Q8TEB7 428 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 APH1AQ96BI3 265 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZMYND19Q96E35 227 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TMEM80Q96HE8 168 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GMPPAQ96IJ6 420 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF385AQ96PM9 386 aaKnown RBP9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SNX18Q96RF0 628 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TEAD3Q99594 435 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NUAK2Q9H093 628 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 KCNN2Q9H2S1 579 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FANCFQ9NPI8 374 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GLTPQ9NZD2 209 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 B3GAT1Q9P2W7 334 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 B9D1Q9UPM9 204 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FLVCR1Q9Y5Y0 555 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 FKBP7Q9Y680 259 aa9.48□□□□□ -0.89
TNFRSF1A-211ENST00000538363 KIAA1549Q9HCM3 1950 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 DAPL1A0PJW8 107 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF724A8MTY0 619 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RNF223E7ERA6 249 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 WBP4O75554 376 aaKnown RBP9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GLCEO94923 617 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RAB36O95755 333 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TGM6O95932 706 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MRPL3P09001 348 aaKnown RBP9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 DBTP11182 482 aaKnown RBP9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ATP6V1B1P15313 513 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 SELENOPP49908 381 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 P2RY4P51582 365 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GABARAPL2P60520 117 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GLO1Q04760 184 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF91Q05481 1191 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ST3GAL4Q11206 333 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 KCTD21Q4G0X4 260 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ACSF3Q4G176 576 aaPredicted RBP9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 AADACL4Q5VUY2 407 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 NSUN5P2Q63ZY6 315 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TMEM211Q6ICI0 200 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TMEM154Q6P9G4 183 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 B3GNT6Q6ZMB0 384 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ERI1Q8IV48 349 aaKnown RBP9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR10H4Q8NGA5 316 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR2AJ1Q8NGZ0 328 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 APH1BQ8WW43 257 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 GGHQ92820 318 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PTP4A1Q93096 173 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TSSK2Q96PF2 358 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 OR2M2Q96R28 347 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 CNN2Q99439 309 aaKnown RBP9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PLCXD1Q9NUJ7 323 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 VSX1Q9NZR4 365 aaPredicted RBP9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ERVK-18Q9QC07 812 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 RCE1Q9Y256 329 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 COA3Q9Y2R0 106 aaPredicted RBP9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 PCDHGB5Q9Y5G0 923 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 MED12Q93074 2177 aa9.47□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ATRXP46100 2492 aa9.46□□□□□ -0.89
TNFRSF1A-211ENST00000538363 ZNF407Q9C0G0 2248 aa9.46□□□□□ -0.89
TNFRSF1A-211ENST00000538363 TVP23AA6NH52 213 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF716A6NP11 495 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF587BE7ETH6 402 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 ZNF670-ZNF695F2Z2N8 137 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 MYL12BO14950 172 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 SLC19A2O60779 497 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 WISP2O76076 250 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 APOL3O95236 402 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 STSP08842 583 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 TMIGD3P0DMS9 266 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CLUP10909 449 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 GABRB1P18505 474 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 CRHBPP24387 322 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 NAA10P41227 235 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 RUNX1T1Q06455 604 aa9.46□□□□□ -0.9
TNFRSF1A-211ENST00000538363 RAB40BQ12829 278 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms