RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 TMEM204Q9BSN7 226 aa15.71■□□□□ 0.11
CCDC61-201ENST00000536603 ULBP2Q9BZM5 246 aa15.71■□□□□ 0.11
CCDC61-201ENST00000536603 VNN3Q9NY84 501 aa15.71■□□□□ 0.11
CCDC61-201ENST00000536603 DNHD1Q96M86 4753 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 MCIDASD6RGH6 385 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 CDC42EP2O14613 210 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 TIPRLO75663 272 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 KRT36O76013 467 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 GADD45GO95257 159 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 WNT11O96014 354 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 SLC9A3P48764 834 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 RPS4XP62701 263 aaKnown RBP15.7■□□□□ 0.1
CCDC61-201ENST00000536603 KLHL17Q6TDP4 642 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 OR4K5Q8NGD3 323 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 OR13C2Q8NGS9 318 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 TMEM54Q969K7 222 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 ZNF347Q96SE7 839 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 NELFAQ9H3P2 528 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 GLTPQ9NZD2 209 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 TMEM5Q9Y2B1 443 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 RNF115Q9Y4L5 304 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 AP4S1Q9Y587 144 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 FN1P02751 2386 aaKnown RBP15.7■□□□□ 0.1
CCDC61-201ENST00000536603 DSCAMO60469 2012 aa15.7■□□□□ 0.1
CCDC61-201ENST00000536603 ROS1P08922 2347 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 ZNF99A8MXY4 864 aaPredicted RBP15.69■□□□□ 0.1
CCDC61-201ENST00000536603 M0R1B8 84 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 SEC14L2O76054 403 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 PGA4P0DJD7 388 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 PGA3P0DJD8 388 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 RRM2P31350 389 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 PTH2RP49190 550 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 DAP3P51398 398 aaKnown RBP15.69■□□□□ 0.1
CCDC61-201ENST00000536603 CTXN1P60606 82 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 UBE2NP61088 152 aaKnown RBP15.69■□□□□ 0.1
CCDC61-201ENST00000536603 RUNX1T1Q06455 604 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 FHL1Q13642 323 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 ANKDD1AQ495B1 522 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 TMEM108Q6UXF1 575 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 CXXC5Q7LFL8 322 aaKnown RBP15.69■□□□□ 0.1
CCDC61-201ENST00000536603 IGFN1Q86VF2 1251 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 MAGEE2Q8TD90 523 aaPredicted RBP15.69■□□□□ 0.1
CCDC61-201ENST00000536603 ASB10Q8WXI3 467 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 POP5Q969H6 163 aaKnown RBP15.69■□□□□ 0.1
CCDC61-201ENST00000536603 FUZQ9BT04 418 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 S100A14Q9HCY8 104 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 OBP2BQ9NPH6 170 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 ARMC1Q9NVT9 282 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 POFUT2Q9Y2G5 429 aa15.69■□□□□ 0.1
CCDC61-201ENST00000536603 SH3PXD2BA1X283 911 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 IGHG1P01857 330 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 ACADSP16219 412 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 PTAFRP25105 342 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 OMPP47874 163 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 CLRN1P58418 232 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 TUBA1BP68363 451 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 TUBA4AP68366 448 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 TOP3AQ13472 1001 aaPredicted RBP15.68■□□□□ 0.1
CCDC61-201ENST00000536603 ZBED5Q49AG3 693 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 ARMC4Q5T2S8 1044 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 C1QTNF12Q5T7M4 302 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 LRFN4Q6PJG9 635 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 TUBA1AQ71U36 451 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 LRRC75AQ8NAA5 344 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 KBTBD8Q8NFY9 601 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 SPATA3Q8NHX4 192 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 TMEM171Q8WVE6 324 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 AKAP1Q92667 903 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCDC61-201ENST00000536603 TXNIPQ9H3M7 391 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 KRCC1Q9NPI7 259 aaPredicted RBP15.68■□□□□ 0.1
CCDC61-201ENST00000536603 ZNF346Q9UL40 294 aaKnown RBP15.68■□□□□ 0.1
CCDC61-201ENST00000536603 TMCC3Q9ULS5 477 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 MAGED1Q9Y5V3 778 aaPredicted RBP15.68■□□□□ 0.1
CCDC61-201ENST00000536603 CADP27708 2225 aa15.68■□□□□ 0.1
CCDC61-201ENST00000536603 FBN3Q75N90 2809 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 ARPC4-TTLL3A0A0A6YYG9 625 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 ABCD4O14678 606 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 TRMUO75648 421 aaKnown RBP15.67■□□□□ 0.1
CCDC61-201ENST00000536603 QDPRP09417 244 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 HOXB1P14653 301 aaPredicted RBP15.67■□□□□ 0.1
CCDC61-201ENST00000536603 CD40P25942 277 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 PPP1R8Q12972 351 aaKnown RBP15.67■□□□□ 0.1
CCDC61-201ENST00000536603 ADAM5Q6NVV9 412 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 HDDC2Q7Z4H3 204 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 PIAS4Q8N2W9 510 aaPredicted RBP15.67■□□□□ 0.1
CCDC61-201ENST00000536603 SYT14Q8NB59 555 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 LILRB1Q8NHL6 650 aaPredicted RBP15.67■□□□□ 0.1
CCDC61-201ENST00000536603 LRTOMTQ8WZ04 291 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 NEUROG1Q92886 237 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 MRPL13Q9BYD1 178 aaKnown RBP15.67■□□□□ 0.1
CCDC61-201ENST00000536603 GSX2Q9BZM3 304 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 NTN4Q9HB63 628 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 RRP15Q9Y3B9 282 aaKnown RBP15.67■□□□□ 0.1
CCDC61-201ENST00000536603 ARID1AO14497 2285 aa15.67■□□□□ 0.1
CCDC61-201ENST00000536603 NPIPB13A6NJU9 1138 aa15.66■□□□□ 0.1
CCDC61-201ENST00000536603 NPIPB4C9JG80 1138 aa15.66■□□□□ 0.1
CCDC61-201ENST00000536603 HS3ST1O14792 307 aa15.66■□□□□ 0.1
CCDC61-201ENST00000536603 OR10H3O60404 316 aa15.66■□□□□ 0.1
CCDC61-201ENST00000536603 PTP4A3O75365 173 aa15.66■□□□□ 0.1
CCDC61-201ENST00000536603 RPL4P36578 427 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms