RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SGCEO43556 437 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 NSA2O95478 260 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 ZNF77Q15935 545 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 CDONQ4KMG0 1287 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 METRNLQ641Q3 311 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 SUCNR1Q9BXA5 334 aa16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 DIMT1Q9UNQ2 313 aaKnown RBP16.72■□□□□ 0.27
SFSWAP-203ENST00000535236 LRP5LA4QPB2 252 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 APOA2P02652 100 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 KCNAB1Q14722 419 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 YRDCQ86U90 279 aaKnown RBP16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 ST7LQ8TDW4 575 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 KCNIP2Q9NS61 270 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 RAB22AQ9UL26 194 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 ETV7Q9Y603 341 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 RAB27BO00194 218 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 TAPBPO15533 448 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 GLCEO94923 617 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 SCG5P05408 212 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 OR8U8P0C7N1 319 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 RPA2P15927 270 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 PSMB1P20618 241 aaKnown RBP16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 ADPRMQ3LIE5 342 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 CCSMST1Q4G0I0 132 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 FAM71E1Q6IPT2 247 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 ADGRE4PQ86SQ3 457 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 SEMA6DQ8NFY4 1073 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 FAM213BQ8TBF2 198 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 B3GALT4O96024 378 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 PMP2P02689 132 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 RAC1P63000 192 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 EBPQ15125 230 aaKnown RBP16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 OR8G1Q15617 311 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 DUSP6Q16828 381 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 GLIPR1L1Q6UWM5 242 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 LSMEM2Q8N112 164 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 SLC16A11Q8NCK7 471 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 CSF3RQ99062 836 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 PSORS1C1Q9UIG5 152 aa16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 COA3Q9Y2R0 106 aaPredicted RBP16.71■□□□□ 0.27
SFSWAP-203ENST00000535236 RNF4P78317 190 aa16.71■□□□□ 0.26
SFSWAP-203ENST00000535236 OR5AS1Q8N127 324 aa16.71■□□□□ 0.26
SFSWAP-203ENST00000535236 WFDC5Q8TCV5 224 aa16.71■□□□□ 0.26
SFSWAP-203ENST00000535236 TCEAL2Q9H3H9 227 aaPredicted RBP16.71■□□□□ 0.26
SFSWAP-203ENST00000535236 ERVMER34-1Q9H9K5 563 aa16.71■□□□□ 0.26
SFSWAP-203ENST00000535236 ATP23Q9Y6H3 246 aa16.71■□□□□ 0.26
SFSWAP-203ENST00000535236 TARM1B6A8C7 271 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 E9PI62 339 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 PAPLNO95428 1278 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 AADACP22760 399 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 RAB13P51153 203 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 DPPA2Q7Z7J5 298 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 HPSE2Q8WWQ2 592 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 SEC22AQ96IW7 307 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 RNF170Q96K19 258 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 ZNF75AQ96N20 296 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 IP6K3Q96PC2 410 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 TPPP3Q9BW30 176 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 P2RY12Q9H244 342 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 SMCO4Q9NRQ5 59 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 COPS3Q9UNS2 423 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 GPR55Q9Y2T6 319 aaPredicted RBP16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 CRYM-AS1A6NIL9 109 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 IL2RAP01589 272 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 AGFG1P52594 562 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 GPR85P60893 370 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 RPL27P61353 136 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 IL34Q6ZMJ4 242 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 RETREG3Q86VR2 466 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 ARPC5LQ9BPX5 153 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 TMEM38AQ9H6F2 299 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 GLYATL3Q5SZD4 288 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 Q6ZSR9 355 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 FJX1Q86VR8 437 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 CATSPERDQ86XM0 798 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 GCNT2Q8N0V5 402 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 GINS3Q9BRX5 216 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 KLF13Q9Y2Y9 288 aaPredicted RBP16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 LOC100289279A0A1B0GTE1 492 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 K7EQM0 130 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 SELENOFO60613 162 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 APEHP13798 732 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 ECI1P42126 302 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 RAD52P43351 418 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 ZMAT1Q5H9K5 638 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 OR6M1Q8NGM8 313 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 OR1N1Q8NGS0 311 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 FAM3DQ96BQ1 224 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 FCRL1Q96LA6 429 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 FBXL2Q9UKC9 423 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 RPS10-NUDT3A0A1W2PQS6 291 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 SOCS7O14512 581 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 FABP1P07148 127 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 PPP3CBP16298 524 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 RPS10P46783 165 aaKnown RBP16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 MENTQ9BUN1 341 aa16.7■□□□□ 0.26
SFSWAP-203ENST00000535236 IGLV3-10A0A075B6K4 115 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 PYCR3Q53H96 274 aa16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 ZNF468Q5VIY5 522 aaPredicted RBP16.69■□□□□ 0.26
SFSWAP-203ENST00000535236 STEAP1BQ6NZ63 245 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms