RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 RUFY1Q96T51 708 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 HSPB9Q9BQS6 159 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 SPRR2GQ9BYE4 73 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 MAF1Q9H063 256 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 NXF5Q9H1B4 397 aaKnown RBP-0.11□□□□□ -2.43
COPB1-212ENST00000534771 ABCG5Q9H222 651 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 OR52D1Q9H346 318 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 SAV1Q9H4B6 383 aaPredicted RBP-0.11□□□□□ -2.43
COPB1-212ENST00000534771 ZSCAN16Q9H4T2 348 aaPredicted RBP-0.11□□□□□ -2.43
COPB1-212ENST00000534771 DHX33Q9H6R0 707 aaKnown RBP-0.11□□□□□ -2.43
COPB1-212ENST00000534771 THUMPD1Q9NXG2 353 aaKnown RBP-0.11□□□□□ -2.43
COPB1-212ENST00000534771 C21orf62Q9NYP8 219 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 TRIM10Q9UDY6 481 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 HOOK1Q9UJC3 728 aaKnown RBP-0.11□□□□□ -2.43
COPB1-212ENST00000534771 HYOU1Q9Y4L1 999 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 OR51B4Q9Y5P0 310 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 KDRP35968 1356 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 MSH6P52701 1360 aa-0.11□□□□□ -2.43
COPB1-212ENST00000534771 KMT2EQ8IZD2 1858 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 MALRD1Q5VYJ5 2156 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 PHF3Q92576 2039 aaKnown RBP-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TRBV2A0A0J9YWF9 115 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 G3V4G9 280 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 ZSCAN12O43309 604 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 CHST10O43529 356 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 PFKFB2O60825 505 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 GLSO94925 669 aaPredicted RBP-0.12□□□□□ -2.43
COPB1-212ENST00000534771 HSP90AB1P08238 724 aaKnown RBP-0.12□□□□□ -2.43
COPB1-212ENST00000534771 H2BFMP0C1H6 154 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 CCDC130P13994 396 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 ATF6P18850 670 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TPSB2P20231 275 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 SSTR5P35346 364 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 GPR6P46095 362 aaPredicted RBP-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TDO2P48775 406 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 AP3M2P53677 418 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TAS2R31P59538 309 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 PPP1CBP62140 327 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 NCBP1Q09161 790 aaKnown RBP-0.12□□□□□ -2.43
COPB1-212ENST00000534771 FOXF1Q12946 379 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 VGLL4Q14135 290 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 MXD4Q14582 209 aaPredicted RBP-0.12□□□□□ -2.43
COPB1-212ENST00000534771 OXA1LQ15070 435 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TPSAB1Q15661 275 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 ZNF141Q15928 474 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 SP6Q3SY56 376 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 ORMDL2Q53FV1 153 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TEX30Q5JUR7 227 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 OR52E8Q6IFG1 317 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 PRSS54Q6PEW0 395 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TBPL2Q6SJ96 375 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 CENPUQ71F23 418 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 ASCL5Q7RTU5 278 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 SNX20Q7Z614 316 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 RABEPKQ7Z6M1 372 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TAF8Q7Z7C8 310 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 ANKRD23Q86SG2 305 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 CBWD2Q8IUF1 395 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 MISPQ8IVT2 679 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 CCDC65Q8IXS2 484 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 ZNF101Q8IZC7 436 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 CEP112Q8N8E3 955 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 OR4D9Q8NGE8 314 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 OR6N1Q8NGY5 312 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 PIFOQ8TCI5 191 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 URGCPQ8TCY9 931 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 C20orf166-AS1Q96NR2 134 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TIMM17AQ99595 171 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 SH3GL3Q99963 347 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 NIPSNAP3BQ9BS92 247 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 MMADHCQ9H3L0 296 aaPredicted RBP-0.12□□□□□ -2.43
COPB1-212ENST00000534771 RBKSQ9H477 322 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 REEP4Q9H6H4 257 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 FN3KRPQ9HA64 309 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 SLC38A10Q9HBR0 1119 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 MRPL47Q9HD33 250 aaKnown RBP-0.12□□□□□ -2.43
COPB1-212ENST00000534771 C8orf17Q9NRJ1 99 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 GIN1Q9NXP7 522 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 IL37Q9NZH6 218 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TMOD2Q9NZR1 351 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 HMG20BQ9P0W2 317 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 IL20RAQ9UHF4 553 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 DNPEPQ9ULA0 475 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 MMP17Q9ULZ9 603 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TDRKHQ9Y2W6 561 aaKnown RBP-0.12□□□□□ -2.43
COPB1-212ENST00000534771 MRPS18BQ9Y676 258 aaKnown RBP-0.12□□□□□ -2.43
COPB1-212ENST00000534771 PLXNA3P51805 1871 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 TRIP11Q15643 1979 aa-0.12□□□□□ -2.43
COPB1-212ENST00000534771 SPATA31E1Q6ZUB1 1445 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 SSH2Q76I76 1423 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 CCDC88CQ9P219 2028 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 DOCK8Q8NF50 2099 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 BRD4O60885 1362 aaPredicted RBP-0.13□□□□□ -2.43
COPB1-212ENST00000534771 TRGV4A0A0C4DH28 118 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 IGHV1-3A0A0C4DH29 117 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 A0A0J9YXV3 536 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 A0A1W2PNV4 684 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 A0A1W2PRV1 198 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 C19orf71A6NCJ1 209 aa-0.13□□□□□ -2.43
COPB1-212ENST00000534771 D6RAR5 112 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms