RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TRAV40A0A0B4J280 105 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 PRSS51A0A1B0GVH4 220 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 H0YL77 283 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 RIPK2O43353 540 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 TRIM13O60858 407 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 CLPXO76031 633 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 LSP1P33241 339 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 CRHR1P34998 444 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 CHI3L1P36222 383 aaPredicted RBP10.31□□□□□ -0.76
SVIP-205ENST00000533774 UCP2P55851 309 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 FAM209AQ5JX71 171 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 SAMD5Q5TGI4 173 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 SYT10Q6XYQ8 523 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 H1FNTQ75WM6 255 aaPredicted RBP10.31□□□□□ -0.76
SVIP-205ENST00000533774 OR52P1PQ8NH57 321 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 DACT3Q96B18 629 aaPredicted RBP10.31□□□□□ -0.76
SVIP-205ENST00000533774 UPRTQ96BW1 309 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 SH3GL3Q99963 347 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 ULBP2Q9BZM5 246 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 TSPYL1Q9H0U9 437 aa10.31□□□□□ -0.76
SVIP-205ENST00000533774 AKAP8O43823 692 aaKnown RBP10.3□□□□□ -0.76
SVIP-205ENST00000533774 MFN2O95140 757 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 CRYBA1P05813 215 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 NR2F1P10589 423 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 NCF2P19878 526 aaPredicted RBP10.3□□□□□ -0.76
SVIP-205ENST00000533774 GTF2E2P29084 291 aaKnown RBP10.3□□□□□ -0.76
SVIP-205ENST00000533774 COPZ1P61923 177 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 EMX2Q04743 252 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 PMS2P3Q13401 168 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 GNA13Q14344 377 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 ZMYND11Q15326 602 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 SPATA46Q5T0L3 261 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 Q6YL49 198 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 UEVLDQ8IX04 471 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 MIER2Q8N344 545 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 SLC22A24Q8N4F4 322 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 POU5F2Q8N7G0 328 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 OR10S1Q8NGN2 331 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 IPCEF1Q8WWN9 437 aaPredicted RBP10.3□□□□□ -0.76
SVIP-205ENST00000533774 TUBGCP3Q96CW5 907 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 DIRC2Q96SL1 478 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 CDH20Q9HBT6 801 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 TCF7L1Q9HCS4 588 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 ASH2LQ9UBL3 628 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 FBXL3Q9UKT7 428 aa10.3□□□□□ -0.76
SVIP-205ENST00000533774 ZNF443Q9Y2A4 671 aaPredicted RBP10.3□□□□□ -0.76
SVIP-205ENST00000533774 NPHS1O60500 1241 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 SNAP29O95721 258 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 ADH4P08319 380 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 PPIAL4GP0DN37 164 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 THRBP10828 461 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 ALDH3A1P30838 453 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 CDKN2CP42773 168 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 SLC3A1Q07837 685 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 FAM189A2Q15884 450 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 SMU1Q2TAY7 513 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 LIN52Q52LA3 116 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 RPS26P11Q5JNZ5 115 aaPredicted RBP10.29□□□□□ -0.76
SVIP-205ENST00000533774 SPANXN4Q5MJ08 99 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 FAM69AQ5T7M9 428 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 RNF220Q5VTB9 566 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 LRFN4Q6PJG9 635 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 PIWIL3Q7Z3Z3 882 aaKnown RBP10.29□□□□□ -0.76
SVIP-205ENST00000533774 LRRC28Q86X40 367 aaPredicted RBP10.29□□□□□ -0.76
SVIP-205ENST00000533774 PEX5LQ8IYB4 626 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 ZNF101Q8IZC7 436 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 ADPRHL1Q8NDY3 354 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 OR1J1Q8NGS3 322 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 OR6N1Q8NGY5 312 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 SLC41A3Q96GZ6 507 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 SIGLEC11Q96RL6 698 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 B3GAT2Q9NPZ5 323 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.29□□□□□ -0.76
SVIP-205ENST00000533774 ASIC5Q9NY37 505 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 KLHL14Q9P2G3 628 aa10.29□□□□□ -0.76
SVIP-205ENST00000533774 A0A087WUJ7 227 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 LRRN3E7EW58 273 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 BGLAPP02818 100 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 MT-ND5P03915 603 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 MELTFP08582 738 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 DRD4P21917 467 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 WNT5AP41221 380 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 CCT5P48643 541 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 MVDP53602 400 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 TMEM155Q4W5P6 130 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 THEM4Q5T1C6 240 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 RUSC1-AS1Q66K80 236 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 ZNF774Q6NX45 483 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 C6orf89Q6UWU4 347 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 MRAPQ8TCY5 172 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 TMEM54Q969K7 222 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 MARS2Q96GW9 593 aaKnown RBP10.28□□□□□ -0.76
SVIP-205ENST00000533774 CCDC115Q96NT0 180 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 MOGAT1Q96PD6 335 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 BCL2L14Q9BZR8 327 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 MSL2Q9HCI7 577 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 TMEM38BQ9NVV0 291 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 NOP53Q9NZM5 478 aaKnown RBP10.28□□□□□ -0.76
SVIP-205ENST00000533774 KLHL21Q9UJP4 597 aa10.28□□□□□ -0.76
SVIP-205ENST00000533774 PRDM4Q9UKN5 801 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms