RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 INTS12Q96CB8 462 aaKnown RBP13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 MCM3APO60318 1980 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 CLDN24A6NM45 220 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 GFYI3L273 518 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 ALPLP05186 524 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 SERPINA7P05543 415 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 EDDM3BP56851 147 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 DAZAP1Q96EP5 407 aaKnown RBP13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 OR52A5Q9H2C5 316 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 FKRPQ9H9S5 495 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 DSCR3O14972 297 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 FGF17O60258 216 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 POLR2IP36954 125 aaKnown RBP13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 THBS3P49746 956 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 IDH3GP51553 393 aaPredicted RBP13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 LSAMPQ13449 338 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 SELENOIQ9C0D9 397 aa13.57□□□□□ -0.24
PCDHA9-202ENST00000532602 A0A1W2PS29 197 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 TSPAN11A1L157 253 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 NOVA1P51513 510 aaKnown RBP13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 WDR88Q6ZMY6 472 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 SYT13Q7L8C5 426 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 NOXA1Q86UR1 476 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 OR1N1Q8NGS0 311 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 LRRC61Q9BV99 259 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 KCNJ16Q9NPI9 418 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 C19orf12Q9NSK7 152 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 RP1L1Q8IWN7 2480 aaPredicted RBP13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 HLA-AP01891 365 aaKnown RBP13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 APEHP13798 732 aaKnown RBP13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 ELAVL4P26378 380 aaKnown RBP13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 HTR1FP30939 366 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 GAB1Q13480 694 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 GDPD3Q7L5L3 318 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 CPEB2Q7Z5Q1 589 aaKnown RBP13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 ACOD1A6NK06 481 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 PPICP45877 212 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 SELENBP1Q13228 472 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 SRSF5Q13243 272 aaKnown RBP13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 STEAP3Q658P3 488 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 ELP2Q6IA86 826 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 NIPSNAP1Q9BPW8 284 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 HIF1ANQ9NWT6 349 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 SGCEO43556 437 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 MED6O75586 246 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 MEP1BQ16820 701 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 GLYR1Q49A26 553 aaPredicted RBP13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 ZNF385BQ569K4 471 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 SFRP5Q5T4F7 317 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 BCORP1Q8N888 145 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 OR4D6Q8NGJ1 314 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 SGPP1Q9BX95 441 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 SLC22A23A1A5C7 686 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 RPL27P61353 136 aaKnown RBP13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 GHSRQ92847 366 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 FAM117AQ9C073 453 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 SERTAD4Q9NUC0 356 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 NDUFAF4Q9P032 175 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 NDRG3Q9UGV2 375 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 PROCRQ9UNN8 238 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 COL24A1Q17RW2 1714 aa13.56□□□□□ -0.24
PCDHA9-202ENST00000532602 TMPRSS11DO60235 418 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 HTD2P86397 168 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 MFGE8Q08431 387 aaPredicted RBP13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 Q6ZTK2 550 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 OR5D18Q8NGL1 313 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 OR4A16Q8NH70 328 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 STK35Q8TDR2 534 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 RTL8AQ9BWD3 113 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 ASF1BQ9NVP2 202 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 SMCHD1A6NHR9 2005 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 LRP5LA4QPB2 252 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 GLCEO94923 617 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 THBS1P07996 1170 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 NID1P14543 1247 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 OPRL1P41146 370 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 FGFBP1Q14512 234 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 YIF1BQ5BJH7 314 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 SLC46A3Q7Z3Q1 461 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 ANKRD9Q96BM1 317 aaPredicted RBP13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 SLC35A4Q96G79 324 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 CNTNAP3BQ96NU0 1288 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 CDX2Q99626 313 aaPredicted RBP13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 MSTNO14793 375 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 SPDEFO95238 335 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 HOXB5P09067 269 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 ZNF93P35789 620 aaPredicted RBP13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 PLK5Q496M5 336 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 C6orf183Q5T699 404 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 CA13Q8N1Q1 262 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 GPR78Q96P69 363 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 SEMA4CQ9C0C4 833 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 MMP28Q9H239 520 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 SPACA1Q9HBV2 294 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 GFOD1Q9NXC2 390 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 CCDC187A0A096LP49 1063 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 IGHV3-15A0A0B4J1V0 119 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 METTL12A8MUP2 240 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 C17orf112F2Z3M2 114 aa13.55□□□□□ -0.24
PCDHA9-202ENST00000532602 TNFRSF10AO00220 468 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms