RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TMEM43Q9BTV4 400 aa13.74□□□□□ -0.21
PTPRU-210ENST00000527027 SLCO1C1Q9NYB5 712 aa13.74□□□□□ -0.21
PTPRU-210ENST00000527027 GLTPQ9NZD2 209 aa13.74□□□□□ -0.21
PTPRU-210ENST00000527027 PRORSD1PA6NEY8 169 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 HMGB1P1B2RPK0 211 aaPredicted RBP13.73□□□□□ -0.21
PTPRU-210ENST00000527027 TPST2O60704 377 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 ADORA3P0DMS8 318 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 CDH12P55289 794 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 WDR4P57081 412 aaKnown RBP13.73□□□□□ -0.21
PTPRU-210ENST00000527027 RGS8P57771 180 aaPredicted RBP13.73□□□□□ -0.21
PTPRU-210ENST00000527027 CDK6Q00534 326 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 RBBP4Q09028 425 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 AWAT1Q58HT5 328 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 GCNT6Q5T4J0 391 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 SWT1Q5T5J6 900 aaKnown RBP13.73□□□□□ -0.21
PTPRU-210ENST00000527027 LRFN4Q6PJG9 635 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 PAQR4Q8N4S7 273 aaPredicted RBP13.73□□□□□ -0.21
PTPRU-210ENST00000527027 ANKRD42Q8N9B4 389 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 OR5J2Q8NH18 312 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 ZNF519Q8TB69 540 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 TSPAN32Q96QS1 320 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 OR52B2Q96RD2 323 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 SLC6A7Q99884 636 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 SH3GL3Q99963 347 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 CDH20Q9HBT6 801 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 MED4Q9NPJ6 270 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 TMEM38BQ9NVV0 291 aa13.73□□□□□ -0.21
PTPRU-210ENST00000527027 IGHV1-69-2A0A0G2JMI3 117 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 C11orf98E9PRG8 122 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 OR6A2O95222 327 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 FARS2O95363 451 aaKnown RBP13.72□□□□□ -0.21
PTPRU-210ENST00000527027 PTHP01270 115 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 LCKP06239 509 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 CCL2P13500 99 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 ADRA2CP18825 462 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 GATA3P23771 443 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 RAD52P43351 418 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 MOGQ16653 247 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 DCAF12L2Q5VW00 463 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 TMEM53Q6P2H8 277 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 SLC35D2Q76EJ3 337 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 DPPA2Q7Z7J5 298 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 BPIFB2Q8N4F0 458 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 ZDHHC22Q8N966 263 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 BHLHE22Q8NFJ8 381 aaPredicted RBP13.72□□□□□ -0.21
PTPRU-210ENST00000527027 ZNF607Q96SK3 696 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 WFDC6Q9BQY6 131 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 OR51B6Q9H340 312 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 C1orf198Q9H425 327 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 RNF121Q9H920 327 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 ESM1Q9NQ30 184 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 DECR2Q9NUI1 292 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 SLC25A37Q9NYZ2 338 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 SLC13A4Q9UKG4 626 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 WIPI2Q9Y4P8 454 aa13.72□□□□□ -0.21
PTPRU-210ENST00000527027 CLDN25C9JDP6 229 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 DHHO43323 396 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 TPD52L2O43399 206 aaKnown RBP13.71□□□□□ -0.21
PTPRU-210ENST00000527027 SNAP29O95721 258 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 MT-ND5P03915 603 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 FPR2P25090 351 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 UCP2P55851 309 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 ERVS71-1P61550 626 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 ZP4Q12836 540 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 TBC1D28Q2M2D7 210 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 HFEQ30201 348 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 SLC36A2Q495M3 483 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 PRR31Q5SQ13 230 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 LRIF1Q5T3J3 769 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 LINC00114Q6XXX2 140 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 USP51Q70EK9 711 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 MAVSQ7Z434 540 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 RANBP3LQ86VV4 465 aaPredicted RBP13.71□□□□□ -0.21
PTPRU-210ENST00000527027 MSRB3Q8IXL7 192 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 C10orf111Q8N326 155 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 OR1J2Q8NGS2 313 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 RAB1CQ92928 201 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 ZNF566Q969W8 418 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 ZBTB9Q96C00 473 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 TIMD4Q96H15 378 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 SLC25A44Q96H78 314 aaPredicted RBP13.71□□□□□ -0.21
PTPRU-210ENST00000527027 ATP6V1G3Q96LB4 118 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 ZNF747Q9BV97 191 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 BCL2L14Q9BZR8 327 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 EVA1AQ9H8M9 152 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 NTN4Q9HB63 628 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 TCF7L2Q9NQB0 619 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 TAS2R5Q9NYW4 299 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 WNK2Q9Y3S1 2297 aa13.71□□□□□ -0.21
PTPRU-210ENST00000527027 TGP01266 2768 aa13.71□□□□□ -0.22
PTPRU-210ENST00000527027 SERPINB7O75635 380 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 PPIBP23284 216 aaKnown RBP13.7□□□□□ -0.22
PTPRU-210ENST00000527027 SLC6A2P23975 617 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 SLC18A1P54219 525 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 UBA52P62987 128 aaKnown RBP13.7□□□□□ -0.22
PTPRU-210ENST00000527027 PLP2Q04941 152 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 SCARB2Q14108 478 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 ZNF613Q6PF04 617 aa13.7□□□□□ -0.22
PTPRU-210ENST00000527027 TREML1Q86YW5 311 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms