RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 MS4A4EQ96PG1 132 aa6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 SDF2Q99470 211 aa6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 BCL7BQ9BQE9 202 aa6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 BPESC1Q9GZL8 116 aa6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 FBXO34Q9NWN3 711 aa6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 CLN6Q9NWW5 311 aa6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 CALML5Q9NZT1 146 aa6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 ENOPH1Q9UHY7 261 aa6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 MKLN1Q9UL63 735 aa6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 C19orf53Q9UNZ5 99 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 ZNF443Q9Y2A4 671 aaPredicted RBP6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 SPEF1Q9Y4P9 236 aa6.39□□□□□ -1.39
CTNNA1-227ENST00000521387 ARFGEF3Q5TH69 2177 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 A0A087WUU8 490 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 NPIPA5A0A0B4J1W7 369 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CENPVL1A0A0U1RR11 272 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 GXYLT2A0PJZ3 443 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 DUXAA6NLW8 204 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CLDN24A6NM45 220 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CPSF4LA6NMK7 179 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 E7EQL1 145 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 NPIPA7E9PJI5 369 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 MPZL2O60487 215 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CLPXO76031 633 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 PTHP01270 115 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 THY1P04216 161 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 ALOX5P09917 674 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 NPIPA8P0DM63 369 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 TNNI3P19429 210 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 ZNF10P21506 573 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 MDKP21741 143 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 PRKAR1BP31321 381 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 GRK5P34947 590 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 TGFBR1P36897 503 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 LIPAP38571 399 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 MAP3K8P41279 467 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 LHX2P50458 406 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 PDLIM4P50479 330 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CLDN18P56856 261 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 TAS2R41P59536 307 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 KRTAP10-3P60369 221 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 VBP1P61758 197 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CDK5Q00535 292 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 ST3GAL4Q11206 333 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 GINS1Q14691 196 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 EXOSC7Q15024 291 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 TRAM2Q15035 370 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 TBCEQ15813 527 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 MAPK14Q16539 360 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 TUSC1Q2TAM9 212 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 PRICKLE4Q2TBC4 344 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 ANKDD1AQ495B1 522 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 ENTPD8Q5MY95 495 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 TMEM201Q5SNT2 666 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CCNJQ5T5M9 372 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 ASPHD2Q6ICH7 369 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CD300LDQ6UXZ3 194 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 ZNF836Q6ZNA1 936 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 BCDIN3DQ7Z5W3 292 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 P2RY8Q86VZ1 359 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 NKAIN4Q8IVV8 208 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 LINC00471Q8N535 108 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 IQCF1Q8N6M8 205 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 TCEANCQ8N8B7 351 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 OR8K3Q8NH51 312 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 NDNFQ8TB73 568 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 PTPMT1Q8WUK0 201 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 FCGR1BQ92637 280 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 RPL3LQ92901 407 aaKnown RBP6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 IL4I1Q96RQ9 567 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 MCHR1Q99705 422 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 SLC6A7Q99884 636 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 PIMREGQ9BSJ6 248 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 DSN1Q9H410 356 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 PIGUQ9H490 435 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 ARMC7Q9H6L4 198 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 MTHFD2LQ9H903 347 aaPredicted RBP6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CBLN4Q9NTU7 201 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 TAS2R16Q9NYV7 291 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 TVP23BQ9NYZ1 205 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 MAT2BQ9NZL9 334 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 DNAJC27Q9NZQ0 273 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CNIH4Q9P003 139 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 WDR45Q9Y484 360 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 PPIAL4AQ9Y536 164 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 PMF1-BGLAPU3KQ54 211 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 CSMD3Q7Z407 3707 aa6.38□□□□□ -1.39
CTNNA1-227ENST00000521387 EXPH5Q8NEV8 1989 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 A0A087WV62 115 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 ANKRD33BA6NCL7 494 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 EFCAB10A6NFE3 127 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 H3BN98 237 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 NDUFS8O00217 210 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 PRKYO43930 277 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 PIP5K1CO60331 668 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 PLOD3O60568 738 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 LYPD3O95274 346 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 TSPAN15O95858 294 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 CBX7O95931 251 aa6.37□□□□□ -1.39
CTNNA1-227ENST00000521387 AGR2O95994 175 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms