RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 TAF4O00268 1085 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 ZNF593O00488 134 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 MAGEB4O15481 346 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TRAF3IP2O43734 574 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 SLC16A7O60669 478 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 EIF1BO60739 113 aaKnown RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 UPK3AO75631 287 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 RGS9O75916 674 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 CDRT1O95170 752 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 GPANK1O95872 356 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 PLGP00747 810 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 OPN1LWP04000 364 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 HRGP04196 525 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TACSTD2P09758 323 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 CLEC2LP0C7M8 214 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 RFPL3SP0C7P2 107 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 BMP4P12644 408 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 GTF2E2P29084 291 aaKnown RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 RBMS1P29558 406 aaKnown RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 SDC2P34741 201 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 SFTPDP35247 375 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 SOX6P35712 828 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 ETV6P41212 452 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 CD97P48960 835 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 AGFG1P52594 562 aaKnown RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 GBX2P52951 348 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 BIDP55957 195 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 OR2B6P58173 313 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 RPS11P62280 158 aaKnown RBP eCLIP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 INSL4Q14641 139 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 MELKQ14680 651 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 ZNF846Q147U1 533 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 CDK5R1Q15078 307 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TGIF1Q15583 401 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 HSPB2Q16082 182 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 ETFDHQ16134 617 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 HIST3H3Q16695 136 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TEX30Q5JUR7 227 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 THEM4Q5T1C6 240 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 ABHD17BQ5VST6 288 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 SPINK14Q6IE38 97 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 FDX2Q6P4F2 183 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 RPL22L1Q6P5R6 122 aaKnown RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TUBA3EQ6PEY2 450 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 UNQ9370/PRO34162Q6UXP9 181 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 RPTNQ6XPR3 784 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 PLEKHG7Q6ZR37 379 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TRILQ7L0X0 811 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TMPRSS7Q7RTY8 843 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 DPY19L4Q7Z388 723 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 CCDC190Q86UF4 302 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 MS4A15Q8N5U1 240 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 FAM83FQ8NEG4 500 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 OR6X1Q8NH79 312 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 OTOSQ8NHW6 89 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 ABHD4Q8TB40 342 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 HAVCR2Q8TDQ0 301 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 GHSRQ92847 366 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 RELTQ969Z4 430 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 MAP6Q96JE9 813 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 ADAD1Q96M93 576 aaKnown RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 KLHL15Q96M94 604 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 JSRP1Q96MG2 331 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 INTS14Q96SY0 518 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 FAM173AQ9BQD7 235 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TMED9Q9BVK6 235 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 OR2B2Q9GZK3 357 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 WDR12Q9GZL7 423 aaKnown RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 PPIL3Q9H2H8 161 aaKnown RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TMEM185BQ9H7F4 350 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 HMG20AQ9NP66 347 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 ZFP64Q9NPA5 681 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 SNTG1Q9NSN8 517 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 MRPL22Q9NWU5 206 aaKnown RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 MED29Q9NX70 200 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 QPCTLQ9NXS2 382 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 LRFN1Q9P244 771 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 KLHL9Q9P2J3 617 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 CRNNQ9UBG3 495 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 PLEKHB1Q9UF11 243 aaPredicted RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 MRM2Q9UI43 246 aaKnown RBP4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 DKKL1Q9UK85 242 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 NPIPA1Q9UND3 350 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 RASD1Q9Y272 281 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 B3GNT3Q9Y2A9 372 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 PEX16Q9Y5Y5 336 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TMEM14AQ9Y6G1 99 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 LOC400499M0QZD8 3231 aa4.85□□□□□ -1.63
SCARNA20.4-201ENST00000516969 APC2O95996 2303 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 ARHGAP21Q5T5U3 1957 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 IGKV1D-43A0A0B4J1Z2 117 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 TRAV1-2A0A0B4J238 106 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 SLC35F4A4IF30 521 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 PINLYPA6NC86 204 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 CD8B2A6NJW9 211 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 GJE1A6NN92 205 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 LINC01387J3KSC0 135 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 J3QRK9 145 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 CTDSP2O14595 271 aa4.84□□□□□ -1.63
SCARNA20.4-201ENST00000516969 DVL2O14641 736 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms