RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 ACADSP16219 412 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 IFNA8P32881 189 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 SERPINF1P36955 418 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 CTXN1P60606 82 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 MXRA7P84157 204 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 VLDLRP98155 873 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 FHL1Q13642 323 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 ADIPOQQ15848 244 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 MSMPQ1L6U9 139 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 GSG1Q2KHT4 349 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 ALG10Q5BKT4 473 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 ARMC4Q5T2S8 1044 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 ZNF544Q6NX49 715 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 PODNL1Q6PEZ8 512 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 BIVMQ86UB2 503 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 DEFB107AQ8IZN7 70 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 OFCC1Q8IZS5 231 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 LRRC18Q8N456 261 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 SLC22A24Q8N4F4 322 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 FITM2Q8N6M3 262 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 ANKS4BQ8N8V4 417 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 OR4K5Q8NGD3 323 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 HDAC2Q92769 488 aaKnown RBP9.96□□□□□ -0.82
VCAN-212ENST00000515397 ADAD1Q96M93 576 aaKnown RBP9.96□□□□□ -0.82
VCAN-212ENST00000515397 ZNF75AQ96N20 296 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 VRK1Q99986 396 aaPredicted RBP9.96□□□□□ -0.82
VCAN-212ENST00000515397 KATNB1Q9BVA0 655 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 MRPL13Q9BYD1 178 aaKnown RBP9.96□□□□□ -0.82
VCAN-212ENST00000515397 CA10Q9NS85 328 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 DCAF13Q9NV06 445 aaKnown RBP9.96□□□□□ -0.82
VCAN-212ENST00000515397 NDUFAF4Q9P032 175 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 FZR1Q9UM11 496 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 ENPP4Q9Y6X5 453 aa9.96□□□□□ -0.82
VCAN-212ENST00000515397 IGHV4-30-2A0A087WSY4 118 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 TRBV4-1A0A0J9YWV2 114 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 EFCAB9A8MZ26 197 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 H7C1C5 153 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 DYNC1I1O14576 645 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 GPRIN2O60269 458 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 TMCC2O75069 709 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 ZNF14P17017 642 aaPredicted RBP9.95□□□□□ -0.82
VCAN-212ENST00000515397 ZNF26P17031 533 aaPredicted RBP9.95□□□□□ -0.82
VCAN-212ENST00000515397 ARR3P36575 388 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 NUDT6P53370 316 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 LCN6P62502 163 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 ERVK-25P63136 954 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 PRKCDQ05655 676 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 DBPQ10586 325 aaPredicted RBP9.95□□□□□ -0.82
VCAN-212ENST00000515397 SGCAQ16586 387 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 SWI5Q1ZZU3 235 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 FGD3Q5JSP0 725 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 OTPQ5XKR4 325 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 OAFQ86UD1 273 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 ZNF525Q8N782 197 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 LRRC75AQ8NAA5 344 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 SLC7A13Q8TCU3 470 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 LIPHQ8WWY8 451 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 NANOS1Q8WY41 292 aaKnown RBP9.95□□□□□ -0.82
VCAN-212ENST00000515397 FAM46AQ96IP4 442 aaKnown RBP9.95□□□□□ -0.82
VCAN-212ENST00000515397 C7orf34Q96L11 122 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 FOXN4Q96NZ1 517 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 REG4Q9BYZ8 158 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 OR51B6Q9H340 312 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 RNF121Q9H920 327 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 TMEM38BQ9NVV0 291 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 CD300AQ9UGN4 299 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 IL20RAQ9UHF4 553 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 RPS6KA6Q9UK32 745 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 ARFGEF3Q5TH69 2177 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 ABCA1O95477 2261 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 HIVEP2P31629 2446 aa9.95□□□□□ -0.82
VCAN-212ENST00000515397 TMEM129A0AVI4 362 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 B2RBV5 119 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 NDUFAB1O14561 156 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 IMPA2O14732 288 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 ARPC2O15144 300 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 GMNNO75496 209 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 DCTN3O75935 186 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 H1F0P07305 194 aaKnown RBP9.94□□□□□ -0.82
VCAN-212ENST00000515397 TSPAN19P0C672 248 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 HOXB4P17483 251 aaPredicted RBP9.94□□□□□ -0.82
VCAN-212ENST00000515397 PCSK6P29122 969 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 CHRNB3Q05901 458 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 CD47Q08722 323 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 SNTB2Q13425 540 aaKnown RBP9.94□□□□□ -0.82
VCAN-212ENST00000515397 DAG1Q14118 895 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 SEC23BQ15437 767 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 CARTPTQ16568 116 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 HIST3H3Q16695 136 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 CYP2R1Q6VVX0 501 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 MBOAT2Q6ZWT7 520 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 ZNF627Q7L945 461 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 RRM2BQ7LG56 351 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 PIWIL3Q7Z3Z3 882 aaKnown RBP9.94□□□□□ -0.82
VCAN-212ENST00000515397 CYP4Z1Q86W10 505 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 ZNF584Q8IVC4 421 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 CCDC36Q8IYA8 594 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 PGAM4Q8N0Y7 254 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 SVOPLQ8N434 492 aa9.94□□□□□ -0.82
VCAN-212ENST00000515397 PAQR4Q8N4S7 273 aaPredicted RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms