RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 PRRC1Q96M27 445 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 MRPL13Q9BYD1 178 aaKnown RBP9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 MRPL37Q9BZE1 423 aaKnown RBP9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 RAB1BQ9H0U4 201 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 MED4Q9NPJ6 270 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 GMPR2Q9P2T1 348 aaKnown RBP9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 AP3M1Q9Y2T2 418 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 CMAHPQ9Y471 501 aa9.02□□□□□ -0.97
HMGXB3-205ENST00000514469 IGHV4-61A0A0C4DH41 118 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 VSTM5A8MXK1 200 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 MCIDASD6RGH6 385 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 PIP5K1CO60331 668 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 SERPINA5P05154 406 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 F13BP05160 661 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 ERCC1P07992 297 aaPredicted RBP9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 QDPRP09417 244 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 PATE4P0C8F1 98 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 OR8G3PP0DMU2 310 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 COX4I1P13073 169 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 GIFP27352 417 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 GLRXP35754 106 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 MDH1P40925 334 aaKnown RBP9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 AQP2P41181 271 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 DAP3P51398 398 aaKnown RBP9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 ZNF133P52736 654 aaPredicted RBP9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 CLRN1P58418 232 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 RPS23P62266 143 aaKnown RBP9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 SELENOWP63302 87 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 GGTLC2Q14390 218 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 RAB39AQ14964 217 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 HSP90B2PQ58FF3 399 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 C10orf128Q5T292 105 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 ARMC4Q5T2S8 1044 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 C8orf82Q6P1X6 216 aaPredicted RBP9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 CSPG4Q6UVK1 2322 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 DPPA2Q7Z7J5 298 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 SLC15A3Q8IY34 581 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 OFCC1Q8IZS5 231 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 OR4K5Q8NGD3 323 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 MOSPD2Q8NHP6 518 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 NEU4Q8WWR8 484 aaPredicted RBP9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 MCHR2Q969V1 340 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 TPD52L3Q96J77 140 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 ZNF347Q96SE7 839 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 MDFIQ99750 246 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 SH3GL3Q99963 347 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 BPESC1Q9GZL8 116 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 DYNLRB1Q9NP97 96 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 INIPQ9NRY2 104 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 SLC7A8Q9UHI5 535 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 A4GNTQ9UNA3 340 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 HIF3AQ9Y2N7 669 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 MED31Q9Y3C7 131 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 SPEF1Q9Y4P9 236 aa9.01□□□□□ -0.97
HMGXB3-205ENST00000514469 HTR3EA5X5Y0 456 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 NME4O00746 187 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 SYNGR3O43761 229 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 TRMUO75648 421 aaKnown RBP9□□□□□ -0.97
HMGXB3-205ENST00000514469 FARS2O95363 451 aaKnown RBP9□□□□□ -0.97
HMGXB3-205ENST00000514469 STAMBPO95630 424 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 IGHMP01871 453 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 DAOP14920 347 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 ACADSP16219 412 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 ZNF23P17027 643 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 FUT4P22083 530 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 GZMKP49863 264 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 SLC7A2P52569 658 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 GALK2Q01415 458 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 LIPEQ05469 1076 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 ST3GAL3Q11203 375 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 CARTPTQ16568 116 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 CHRFAM7AQ494W8 412 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 CYB5R2Q6BCY4 276 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 VTCN1Q7Z7D3 282 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 ZCCHC24Q8N2G6 241 aaKnown RBP9□□□□□ -0.97
HMGXB3-205ENST00000514469 ZNF540Q8NDQ6 660 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 LZICQ8WZA0 190 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 NMD3Q96D46 503 aaKnown RBP9□□□□□ -0.97
HMGXB3-205ENST00000514469 BPIFA2Q96DR5 249 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 FOXN4Q96NZ1 517 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 C1orf198Q9H425 327 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 SMURF2Q9HAU4 748 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 MAN2C1Q9NTJ4 1040 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 STX18Q9P2W9 335 aaKnown RBP9□□□□□ -0.97
HMGXB3-205ENST00000514469 CDC42EP3Q9UKI2 254 aa9□□□□□ -0.97
HMGXB3-205ENST00000514469 JMJD1CQ15652 2540 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 CHD3Q12873 2000 aaKnown RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 SH3PXD2BA1X283 911 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 M0R233 179 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 CXCR6O00574 342 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 FFAR1O14842 300 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 CCDC22O60826 627 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 SLC2A10O95528 541 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 SNAP29O95721 258 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 IFNW1P05000 195 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 ADRA2AP08913 450 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 MMP7P09237 267 aaPredicted RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 TACSTD2P09758 323 aa8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 APEHP13798 732 aaKnown RBP8.99□□□□□ -0.97
HMGXB3-205ENST00000514469 LSP1P33241 339 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms