RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 ZNF133P52736 654 aaPredicted RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 SLC25A1P53007 311 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 CLRN1P58418 232 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 LCN6P62502 163 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 IL5RAQ01344 420 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 MAD2L1BPQ15013 274 aaPredicted RBP11.09□□□□□ -0.63
PDPN-210ENST00000513143 IGFBP7Q16270 282 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 THEM4Q5T1C6 240 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 CARD17Q5XLA6 110 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 CPOQ8IVL8 374 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 CNEP1R1Q8N9A8 125 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 SYT14Q8NB59 555 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 FBLIM1Q8WUP2 373 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 SFXN3Q9BWM7 321 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 LINC00470Q9BZP3 86 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 NMNAT2Q9BZQ4 307 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 SYT4Q9H2B2 425 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 SLCO5A1Q9H2Y9 848 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 GLTPQ9NZD2 209 aa11.09□□□□□ -0.63
PDPN-210ENST00000513143 A0A0G2JNJ9 132 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 FAM183AA6NL82 134 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 EIF4E1BA6NMX2 242 aaKnown RBP11.08□□□□□ -0.64
PDPN-210ENST00000513143 HSPB2A8KAH6 182 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 CCL21O00585 134 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 IL18BPO95998 194 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 NR2C1P13056 603 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 GNLYP22749 145 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 CRABP1P29762 137 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 CSNK1A1P48729 337 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 SIRPAP78324 504 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 CD47Q08722 323 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 HSPB2Q16082 182 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 OCLNQ16625 522 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 PHYHD1Q5SRE7 291 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 TSPO2Q5TGU0 170 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 AADACL4Q5VUY2 407 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 NXNL2Q5VZ03 156 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 PLBD1Q6P4A8 553 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 VWA1Q6PCB0 445 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 LRFN4Q6PJG9 635 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 CXXC5Q7LFL8 322 aaKnown RBP11.08□□□□□ -0.64
PDPN-210ENST00000513143 THAP5Q7Z6K1 395 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 ATCAYQ86WG3 371 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 ZNF100Q8IYN0 542 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 OR6V1Q8N148 313 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 ZNF454Q8N9F8 522 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 OR6N1Q8NGY5 312 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 APH1BQ8WW43 257 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 RND1Q92730 232 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 APH1AQ96BI3 265 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 STARD4Q96DR4 205 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 CNBD2Q96M20 576 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 RBP7Q96R05 134 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 HCAR1Q9BXC0 346 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 C12orf49Q9H741 205 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 RPRD1BQ9NQG5 326 aaKnown RBP11.08□□□□□ -0.64
PDPN-210ENST00000513143 PLSCR4Q9NRQ2 329 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 RASSF1Q9NS23 344 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 AASSQ9UDR5 926 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 Q9UFV3 132 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 FKBP7Q9Y680 259 aa11.08□□□□□ -0.64
PDPN-210ENST00000513143 NCOA6Q14686 2063 aaPredicted RBP11.07□□□□□ -0.64
PDPN-210ENST00000513143 CHD6Q8TD26 2715 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 IGKV1D-43A0A0B4J1Z2 117 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 A0A1B0GUH1 482 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 WBP4O75554 376 aaKnown RBP11.07□□□□□ -0.64
PDPN-210ENST00000513143 UPK3AO75631 287 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 CGAP01215 116 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 QDPRP09417 244 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 CTLA4P16410 223 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 OPRM1P35372 400 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 TEKQ02763 1124 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 FMODQ06828 376 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 LGALS3BPQ08380 585 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 CDK5R2Q13319 367 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 MEDAGQ5VYS4 303 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 SLC25A47Q6Q0C1 308 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 TFAP2EQ6VUC0 442 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 NCCRP1Q6ZVX7 275 aaPredicted RBP11.07□□□□□ -0.64
PDPN-210ENST00000513143 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.07□□□□□ -0.64
PDPN-210ENST00000513143 BCDIN3DQ7Z5W3 292 aaKnown RBP11.07□□□□□ -0.64
PDPN-210ENST00000513143 BTLAQ7Z6A9 289 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 ZBTB46Q86UZ6 589 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 GPR137CQ8N3F9 429 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 POMGNT2Q8NAT1 580 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 BBS1Q8NFJ9 593 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 OR9Q1Q8NGQ5 310 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 OR2T4Q8NH00 348 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 CNIH3Q8TBE1 160 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 MCHR2Q969V1 340 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 TSSK2Q96PF2 358 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 NUAK2Q9H093 628 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 MED20Q9H944 212 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 SRA1Q9HD15 236 aaKnown RBP11.07□□□□□ -0.64
PDPN-210ENST00000513143 B3GAT2Q9NPZ5 323 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 SLC7A10Q9NS82 523 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 CLN6Q9NWW5 311 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 ASB6Q9NWX5 421 aa11.07□□□□□ -0.64
PDPN-210ENST00000513143 ZNF629Q9UEG4 869 aaPredicted RBP11.07□□□□□ -0.64
PDPN-210ENST00000513143 B9D1Q9UPM9 204 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms