RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 UHRF2Q96PU4 802 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 SMIM14Q96QK8 99 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 NRSN2Q9GZP1 204 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 WWTR1Q9GZV5 400 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PLEKHF2Q9H8W4 249 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 ISYNA1Q9NPH2 558 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 CYSLTR2Q9NS75 346 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 TAS2R16Q9NYV7 291 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 AMMECR1Q9Y4X0 333 aaPredicted RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 B4E171 279 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 FBXO45P0C2W1 286 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 ACHEP22303 614 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 TSPAN7P41732 249 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 CAMLGP49069 296 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 TGM4P49221 684 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 TAS2R19P59542 299 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PAGE3Q5JUK9 113 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PMS2CLQ68D20 193 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PLAG1Q6DJT9 500 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 TCTN3Q6NUS6 607 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 GPR155Q7Z3F1 870 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 VRK3Q8IV63 474 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 OR4F15Q8NGB8 312 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 OR52H1Q8NGJ2 320 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 CNIH3Q8TBE1 160 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 NANPQ8TBE9 248 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 OIT3Q8WWZ8 545 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 ZCCHC14Q8WYQ9 949 aaKnown RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 DCUN1D4Q92564 292 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 DPF1Q92782 380 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 ABHD6Q9BV23 337 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PDFQ9HBH1 243 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 ETAA1Q9NY74 926 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 COPS3Q9UNS2 423 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 NRAPQ86VF7 1730 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 NME4O00746 187 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 GAPDHSO14556 408 aaPredicted RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 GALR2O43603 387 aaPredicted RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 SNAP29O95721 258 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 CISD3P0C7P0 127 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PTAFRP25105 342 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 SERPINF1P36955 418 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PSMB10P40306 273 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 HLCSP50747 726 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 KRTCAP3Q53RY4 240 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 WDR74Q6RFH5 385 aaPredicted RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 CFAP77Q6ZQR2 320 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 GABRG1Q8N1C3 465 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 NPEPL1Q8NDH3 523 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 OR5M9Q8NGP3 310 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 TSLPQ969D9 159 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 C1QTNF6Q9BXI9 259 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PPA2Q9H2U2 334 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 UCK1Q9HA47 277 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 NDUFAF4Q9P032 175 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 OR52A1Q9UKL2 312 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 A0A1B0GUH1 482 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 DHHO43323 396 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PPIHO43447 177 aaKnown RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 KIAA0513O60268 411 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 CHRM2P08172 466 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 SP9P0CG40 484 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 ZNF728P0DKX0 622 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 MMP11P24347 488 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 FPR3P25089 353 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 ARRB2P32121 409 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 CEACAM3P40198 252 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 ETV5P41161 510 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 RPS18P62269 152 aaKnown RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 HOXC5Q00444 222 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 SPOCK1Q08629 439 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PCGF3Q3KNV8 242 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 COX15Q7KZN9 410 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 TMEM151AQ8N4L1 468 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 CCL4L1Q8NHW4 92 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 CD300LFQ8TDQ1 290 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 CXorf36Q9H7Y0 433 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 TRPM3Q9HCF6 1732 aaPredicted RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 NUDT19A8MXV4 375 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PLPP1O14494 284 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 LIPCP11150 499 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 SRD5A2P31213 254 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 GIPRP48546 466 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 PTH2RP49190 550 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 RBP2P50120 134 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 FOXA1P55317 472 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 NUFIP2Q7Z417 695 aaKnown RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 ABI3BPQ7Z7G0 1075 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 OR1J1Q8NGS3 322 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 SLC38A5Q8WUX1 472 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 RAB3CQ96E17 227 aa3.89□□□□□ -1.79
VCAN-209ENST00000513016 MRPS24Q96EL2 167 aaKnown RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 ZC3H10Q96K80 434 aaKnown RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 NUDT16L1Q9BRJ7 211 aaKnown RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 TP63Q9H3D4 680 aaPredicted RBP3.89□□□□□ -1.79
VCAN-209ENST00000513016 COL22A1Q8NFW1 1626 aaPredicted RBP3.88□□□□□ -1.79
VCAN-209ENST00000513016 E9PI62 339 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 M0R082 166 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TSPAN4O14817 238 aa3.88□□□□□ -1.79
VCAN-209ENST00000513016 TBX10O75333 385 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms