RNA–Protein interactions for RNA: ENST00000511843.5

RNF4-215, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-215ENST00000511843 ANKS4BQ8N8V4 417 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 OR51A7Q8NH64 312 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 LIPHQ8WWY8 451 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 MCHR2Q969V1 340 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 POM121Q96HA1 1249 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 ZNF75AQ96N20 296 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 MRPL13Q9BYD1 178 aaKnown RBP11.51□□□□□ -0.57
RNF4-215ENST00000511843 TMEM38BQ9NVV0 291 aa11.51□□□□□ -0.57
RNF4-215ENST00000511843 TLN2Q9Y4G6 2542 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 NSD1Q96L73 2696 aaPredicted RBP11.5□□□□□ -0.57
RNF4-215ENST00000511843 RTTNQ86VV8 2226 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 IGHV4-30-2A0A087WSY4 118 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 IGKV1D-43A0A0B4J1Z2 117 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 H7C417 338 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 IGF2P01344 180 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 TSPAN19P0C672 248 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 SAGP10523 405 aaPredicted RBP11.5□□□□□ -0.57
RNF4-215ENST00000511843 ACADSP16219 412 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 CDAP32320 146 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 IFNA8P32881 189 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 SERPINF1P36955 418 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 RAB1AP62820 205 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 CHRNB3Q05901 458 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 KRTAP1-1Q07627 177 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 SNTB2Q13425 540 aaKnown RBP11.5□□□□□ -0.57
RNF4-215ENST00000511843 FHL1Q13642 323 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 RAB39AQ14964 217 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 ETFDHQ16134 617 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 HIST3H3Q16695 136 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 ALG10Q5BKT4 473 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 ARMC4Q5T2S8 1044 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 OR4K5Q8NGD3 323 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 NANOS1Q8WY41 292 aaKnown RBP11.5□□□□□ -0.57
RNF4-215ENST00000511843 HDAC2Q92769 488 aaKnown RBP11.5□□□□□ -0.57
RNF4-215ENST00000511843 SORCS2Q96PQ0 1159 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 REG4Q9BYZ8 158 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 BARX1Q9HBU1 254 aaPredicted RBP11.5□□□□□ -0.57
RNF4-215ENST00000511843 TAGLN3Q9UI15 199 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 RPS6KA6Q9UK32 745 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 HIF3AQ9Y2N7 669 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 ENPP4Q9Y6X5 453 aa11.5□□□□□ -0.57
RNF4-215ENST00000511843 FN1P02751 2386 aaKnown RBP11.49□□□□□ -0.57
RNF4-215ENST00000511843 EFCAB9A8MZ26 197 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 NDUFAB1O14561 156 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 CDC42EP2O14613 210 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 GPRIN2O60269 458 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 OR8G3PP0DMU2 310 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 PCSK6P29122 969 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 DAP3P51398 398 aaKnown RBP11.49□□□□□ -0.57
RNF4-215ENST00000511843 SNRPD2P62316 118 aaKnown RBP11.49□□□□□ -0.57
RNF4-215ENST00000511843 VLDLRP98155 873 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 PRKCDQ05655 676 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 CD47Q08722 323 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 DAG1Q14118 895 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 MSMPQ1L6U9 139 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 FGD3Q5JSP0 725 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 PIWIL3Q7Z3Z3 882 aaKnown RBP11.49□□□□□ -0.57
RNF4-215ENST00000511843 ZNF584Q8IVC4 421 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 CCDC36Q8IYA8 594 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 ZCCHC24Q8N2G6 241 aaKnown RBP11.49□□□□□ -0.57
RNF4-215ENST00000511843 SVOPLQ8N434 492 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 LRRC75AQ8NAA5 344 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 NUP37Q8NFH4 326 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 OR4F15Q8NGB8 312 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 ACOT11Q8WXI4 607 aaPredicted RBP11.49□□□□□ -0.57
RNF4-215ENST00000511843 NSMAFQ92636 917 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 LRRC37BQ96QE4 947 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 TNFRSF13CQ96RJ3 184 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 CDRT15Q96T59 188 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 SEPHS2Q99611 448 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 VRK1Q99986 396 aaPredicted RBP11.49□□□□□ -0.57
RNF4-215ENST00000511843 NMNAT1Q9HAN9 279 aaPredicted RBP11.49□□□□□ -0.57
RNF4-215ENST00000511843 DCAF13Q9NV06 445 aaKnown RBP11.49□□□□□ -0.57
RNF4-215ENST00000511843 NDUFAF4Q9P032 175 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 CSPG4Q6UVK1 2322 aa11.49□□□□□ -0.57
RNF4-215ENST00000511843 TRBV4-1A0A0J9YWV2 114 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 SH3PXD2BA1X283 911 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 H7C1C5 153 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 UBL3O95164 117 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 RAB36O95755 333 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 CCL2P13500 99 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 ZNF26P17031 533 aaPredicted RBP11.48□□□□□ -0.57
RNF4-215ENST00000511843 NPR2P20594 1047 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 PAX7P23759 505 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 CTXN1P60606 82 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 LCN6P62502 163 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 MXRA7P84157 204 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 PODNL1Q6PEZ8 512 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 MBOAT2Q6ZWT7 520 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 OAFQ86UD1 273 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 CYP4Z1Q86W10 505 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 PGAM4Q8N0Y7 254 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 LRRC18Q8N456 261 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 PAQR4Q8N4S7 273 aaPredicted RBP11.48□□□□□ -0.57
RNF4-215ENST00000511843 OR52J3Q8NH60 311 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 SLC7A13Q8TCU3 470 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 NMD3Q96D46 503 aaKnown RBP11.48□□□□□ -0.57
RNF4-215ENST00000511843 FAM46AQ96IP4 442 aaKnown RBP11.48□□□□□ -0.57
RNF4-215ENST00000511843 C7orf34Q96L11 122 aa11.48□□□□□ -0.57
RNF4-215ENST00000511843 TSPAN32Q96QS1 320 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms