RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 KHDRBS3O75525 346 aaKnown RBP13.58□□□□□ -0.24
SCLT1-209ENST00000511426 SULT1C4O75897 302 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 TACSTD2P09758 323 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 GADD45AP24522 165 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 PYCR1P32322 319 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 BIDP55957 195 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 RPS3AP61247 264 aaKnown RBP13.58□□□□□ -0.24
SCLT1-209ENST00000511426 LSAMPQ13449 338 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 CD200R1LQ6Q8B3 271 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 GPAT4Q86UL3 456 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 CDC20BQ86Y33 519 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 KDM8Q8N371 416 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 MEIOBQ8N635 442 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 OR51L1Q8NGJ5 315 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 SNX33Q8WV41 574 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 ASB17Q8WXJ9 295 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 TSSK2Q96PF2 358 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 HES7Q9BYE0 225 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 KCNG2Q9UJ96 466 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 SSR3Q9UNL2 185 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 RCE1Q9Y256 329 aa13.58□□□□□ -0.24
SCLT1-209ENST00000511426 ARPC4-TTLL3A0A0A6YYG9 625 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 A0A1W2PPW3 197 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 NPIPA2E9PIF3 369 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 NPIPA3F8WFD2 350 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 H7C1C5 153 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 EIF1AYO14602 144 aaKnown RBP13.57□□□□□ -0.24
SCLT1-209ENST00000511426 SELENOFO60613 162 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 PGA4P0DJD7 388 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 PGA3P0DJD8 388 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 CTLA4P16410 223 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 PCSK6P29122 969 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 PTGS2P35354 604 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 NAA10P41227 235 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-209ENST00000511426 SERPINB10P48595 397 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 CLRN1P58418 232 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 LCN6P62502 163 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 PPIAP62937 165 aaKnown RBP13.57□□□□□ -0.24
SCLT1-209ENST00000511426 SLC17A1Q14916 467 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 SLC10A1Q14973 349 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 HIST3H3Q16695 136 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 ABLIM2Q6H8Q1 611 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 CREB3L2Q70SY1 520 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 VASH1Q7L8A9 365 aaPredicted RBP13.57□□□□□ -0.24
SCLT1-209ENST00000511426 C4orf36Q96KX1 117 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 TIMP4Q99727 224 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 CXorf56Q9H5V9 222 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 ZDHHC11Q9H8X9 412 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 MED29Q9NX70 200 aa13.57□□□□□ -0.24
SCLT1-209ENST00000511426 PLPP2O43688 288 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 HLA-DPB1P04440 258 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF708P17019 499 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 FGF9P31371 208 aaPredicted RBP13.56□□□□□ -0.24
SCLT1-209ENST00000511426 MAGEA5P43359 124 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 CD97P48960 835 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 TGM4P49221 684 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 LHX2P50458 406 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF133P52736 654 aaPredicted RBP13.56□□□□□ -0.24
SCLT1-209ENST00000511426 GBX2P52951 348 aaPredicted RBP13.56□□□□□ -0.24
SCLT1-209ENST00000511426 CLDN20P56880 219 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 AQP6Q13520 282 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 LIPKQ5VXJ0 399 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 FAM220AQ7Z4H9 259 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 GHDCQ8N2G8 530 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 OR9K2Q8NGE7 335 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 OR10D3Q8NH80 312 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 OTOSQ8NHW6 89 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 ZNRF4Q8WWF5 429 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 TBX5Q99593 518 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 LAMP5Q9UJQ1 280 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 GSTK1Q9Y2Q3 226 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 EML6Q6ZMW3 1958 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 SLC35F4A4IF30 521 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF814B7Z6K7 855 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 SMAD9O15198 467 aaKnown RBP13.56□□□□□ -0.24
SCLT1-209ENST00000511426 TMCC2O75069 709 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 AQP8O94778 261 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 OPN1LWP04000 364 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 ALOX5APP20292 161 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 ENTPD1P49961 510 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 RUNX1T1Q06455 604 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 PCK2Q16822 640 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 DGUOKQ16854 277 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 KLBQ86Z14 1044 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 GLB1L2Q8IW92 636 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 ZADH2Q8N4Q0 377 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 ZNF511Q8NB15 262 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 SLC26A10Q8NG04 563 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 OR6N2Q8NGY6 317 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 NEIL3Q8TAT5 605 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 TXNDC15Q96J42 360 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 KCNN2Q9H2S1 579 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 SF3B6Q9Y3B4 125 aaKnown RBP13.56□□□□□ -0.24
SCLT1-209ENST00000511426 A3GALT2U3KPV4 340 aa13.56□□□□□ -0.24
SCLT1-209ENST00000511426 TRDV1A0A1B0GX56 115 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 CYTIPO60759 359 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 HLA-DQA2P01906 255 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 CELP19835 753 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 CRYBB2P43320 205 aa13.55□□□□□ -0.24
SCLT1-209ENST00000511426 SUCLG1P53597 346 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms