RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 GABRPO00591 440 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 NME2P1O60361 137 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 TSPAN15O95858 294 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 AMBPP02760 352 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 WNT1P04628 370 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 GRK4P32298 578 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 GLRBP48167 497 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 AFF3P51826 1226 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 UCP2P55851 309 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 ZNF460Q14592 562 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 PRSS8Q16651 343 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 ZNF750Q32MQ0 723 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 FBXO47Q5MNV8 452 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 DCAF15Q66K64 600 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 GGT6Q6P531 493 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 TEX38Q6PEX7 206 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 SHISA2Q6UWI4 295 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 VSIG10LQ86VR7 867 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 EXD3Q8N9H8 876 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 RCBTB1Q8NDN9 531 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 OR51D1Q8NGF3 324 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 OR5L1Q8NGL2 311 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 ISOC2Q96AB3 205 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 C4orf36Q96KX1 117 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 ZNF670Q9BS34 389 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 TRMT61BQ9BVS5 477 aaKnown RBP9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 HRH4Q9H3N8 390 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 MEPEQ9NQ76 525 aaPredicted RBP9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 RHCGQ9UBD6 479 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 FAM50BQ9Y247 325 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 ST3GAL6Q9Y274 331 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 FIS1Q9Y3D6 152 aa9.88□□□□□ -0.83
PDLIM5-210ENST00000508216 SBF2Q86WG5 1849 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 HSPB2A8KAH6 182 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 PRRG1O14668 218 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 DOK2O60496 412 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 WNT11O96014 354 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 CST4P01036 141 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 TUBG1P23258 451 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 HOXC9P31274 260 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 GRK6P43250 576 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 ZNF41P51814 821 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 ERVFRD-1P60508 538 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 UFM1P61960 85 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 RPS23P62266 143 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 PPIGQ13427 754 aaKnown RBP eCLIP9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 KIAA0040Q15053 153 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 OR4D1Q15615 310 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 ZBTB6Q15916 424 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 HSPB2Q16082 182 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 SLC10A6Q3KNW5 377 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 KHDRBS2Q5VWX1 349 aaKnown RBP9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 NPNTQ6UXI9 565 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 FAM151BQ6UXP7 276 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 CD300LDQ6UXZ3 194 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 SLC36A1Q7Z2H8 476 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 PID1Q7Z2X4 250 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 OR10W1Q8NGF6 305 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 GPR150Q8NGU9 434 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 SPSB1Q96BD6 273 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 C16orf58Q96GQ5 468 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 ACCSQ96QU6 501 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 MS4A8Q9BY19 250 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 TUBB1Q9H4B7 451 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 DCP1AQ9NPI6 582 aaPredicted RBP9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 TUBG2Q9NRH3 451 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 GPATCH2LQ9NWQ4 482 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 TMEM260Q9NX78 707 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 FTSJ1Q9UET6 329 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 SLC22A13Q9Y226 551 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 GLI3P10071 1580 aa9.87□□□□□ -0.83
PDLIM5-210ENST00000508216 TGIF2-C20orf24A0A0A6YYL0 155 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 M0R296 226 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 SYNGR4O95473 234 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 TGFB1P01137 390 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 EIF4EP06730 217 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 STAG3L2P0CL84 134 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 CTSAP10619 480 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 PF4V1P10720 104 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 CCL2P13500 99 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 BMP5P22003 454 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 RPL29P47914 159 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 SLC6A9P48067 706 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 RPS8P62241 208 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 RPS25P62851 125 aaKnown RBP9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 CRMP1Q14194 572 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 HIKESHIQ53FT3 197 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 GFI1BQ5VTD9 330 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 OR2T2Q6IF00 324 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 SLC25A26Q70HW3 274 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 XYLT1Q86Y38 959 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 NRMQ8IXM6 262 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 ZNF100Q8IYN0 542 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 GBGT1Q8N5D6 347 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 CCDC71LQ8N9Z2 235 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 ZNF738Q8NE65 137 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 OR5AP2Q8NGF4 316 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 OR51Q1Q8NH59 317 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 NETO1Q8TDF5 533 aa9.86□□□□□ -0.83
PDLIM5-210ENST00000508216 GPR148Q8TDV2 347 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms