RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 IL7P13232 177 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 TBXA2RP21731 343 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 ZXDAP98168 799 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 TOMM34Q15785 309 aaPredicted RBP12.81□□□□□ -0.36
TCOF1-207ENST00000504761 CDH24Q86UP0 819 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 ACBD4Q8NC06 268 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 OR51T1Q8NGJ9 327 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 OR8D4Q8NGM9 314 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 OR10A2Q9H208 303 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 MYOTQ9UBF9 498 aa12.81□□□□□ -0.36
TCOF1-207ENST00000504761 IGHV5-10-1A0A0J9YXX1 117 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 IL32P24001 234 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 HTR2AP28223 471 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 GLP1RP43220 463 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 GABREP78334 506 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 C1QL3Q5VWW1 255 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 DNAAF1Q8NEP3 725 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 PCDHB16Q9NRJ7 776 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 EMC3Q9P0I2 261 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 RHBDD3Q9Y3P4 386 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 ZNF850A8MQ14 1090 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 HRO43593 1189 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 FZD7O75084 574 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 RFPL3O75679 317 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 QDPRP09417 244 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 ZBTB8BQ8NAP8 495 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-207ENST00000504761 SLC25A43Q8WUT9 341 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-207ENST00000504761 ST8SIA1Q92185 356 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 KCNG2Q9UJ96 466 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 MED12Q93074 2177 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 TRDV1A0A1B0GX56 115 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 RAD51DO75771 328 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 DBHP09172 617 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 HLA-DMAP28067 261 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 APLNRP35414 380 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 TGFBR3Q03167 851 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 LTBQ06643 244 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 NRARPQ7Z6K4 114 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 TAAR8Q969N4 342 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 PILRAQ9UKJ1 303 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 DOCK4Q8N1I0 1966 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 TMEM212A6NML5 194 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 PTTG1O95997 202 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 LIPCP11150 499 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 POU3F3P20264 500 aaPredicted RBP12.8□□□□□ -0.36
TCOF1-207ENST00000504761 GLB1L2Q8IW92 636 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 BEST4Q8NFU0 473 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 OR51D1Q8NGF3 324 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 FGGYQ96C11 551 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 TAAR9Q96RI9 348 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 NRIP3Q9NQ35 241 aa12.8□□□□□ -0.36
TCOF1-207ENST00000504761 CCDC187A0A096LP49 1063 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 FTCDNL1E5RQL4 147 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 YES1P07947 543 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 HERV-K104P61576 105 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 ZNF74Q16587 644 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 STEAP3Q658P3 488 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 WDR74Q6RFH5 385 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-207ENST00000504761 ZNF565Q8N9K5 539 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 IL17RDQ8NFM7 739 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 HAVCR2Q8TDQ0 301 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 SLC19A3Q9BZV2 496 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 MMP25Q9NPA2 562 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 FKBP14Q9NWM8 211 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 HRH3Q9Y5N1 445 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 GABRR1P24046 479 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 FOXK1P85037 733 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 FABP5Q01469 135 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 MFAP5Q13361 173 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 LRRC28Q86X40 367 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-207ENST00000504761 POGLUT1Q8NBL1 392 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 TTC9Q92623 222 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 MOGAT1Q96PD6 335 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 ST6GALNAC5Q9BVH7 336 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 PARPBPQ9NWS1 579 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 GPANK1O95872 356 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 AKR1C4P17516 323 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 SERPINA2P20848 420 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 S100A10P60903 97 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 TEKQ02763 1124 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 SLC35D3Q5M8T2 416 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 C12orf73Q69YU5 71 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 XAF1Q6GPH4 301 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 ARSKQ6UWY0 536 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 TPRA1Q86W33 373 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 LIX1LQ8IVB5 337 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 TMEM178AQ8NBL3 297 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 PTPMT1Q8WUK0 201 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-207ENST00000504761 AKAP1Q92667 903 aaKnown RBP eCLIP12.79□□□□□ -0.36
TCOF1-207ENST00000504761 WFDC6Q9BQY6 131 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 MEPEQ9NQ76 525 aaPredicted RBP12.79□□□□□ -0.36
TCOF1-207ENST00000504761 FAM86C1Q9NVL1 165 aa12.79□□□□□ -0.36
TCOF1-207ENST00000504761 MT-ND4P03905 459 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 GIFP27352 417 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 B3GNTL1Q67FW5 361 aaPredicted RBP12.78□□□□□ -0.36
TCOF1-207ENST00000504761 LYPD4Q6UWN0 246 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 TMPRSS11FQ6ZWK6 438 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 ADAMTS14Q8WXS8 1223 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 SGCZQ96LD1 299 aa12.78□□□□□ -0.36
TCOF1-207ENST00000504761 FLRT3Q9NZU0 649 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms