RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 ABCD4O14678 606 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 IMPA2O14732 288 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 PDCD5O14737 125 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 MID1O15344 667 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 EIF4E2O60573 245 aaKnown RBP3.55□□□□□ -1.84
CLTC-209ENST00000498711 PRKRAO75569 313 aaKnown RBP3.55□□□□□ -1.84
CLTC-209ENST00000498711 ARL6IP5O75915 188 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 NKX2-2O95096 273 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 NMBP08949 121 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 CD3GP09693 182 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 ACSM4P0C7M7 580 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 PRR23D2P0DMB1 279 aaPredicted RBP3.55□□□□□ -1.84
CLTC-209ENST00000498711 GABRA1P14867 456 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 LCN1P31025 176 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 CSF2RBP32927 897 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 ACAA2P42765 397 aaKnown RBP3.55□□□□□ -1.84
CLTC-209ENST00000498711 SSR2P43308 183 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 CCR6P51684 374 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 SLC25A1P53007 311 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 RGS8P57771 180 aaPredicted RBP3.55□□□□□ -1.84
CLTC-209ENST00000498711 ACTA2P62736 377 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 ACTG2P63267 376 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 SIRPAP78324 504 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 SIM1P81133 766 aaPredicted RBP3.55□□□□□ -1.84
CLTC-209ENST00000498711 MAT1AQ00266 395 aaKnown RBP3.55□□□□□ -1.84
CLTC-209ENST00000498711 TNFRSF17Q02223 184 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 DMWDQ09019 674 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 ZNF273Q14593 569 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 HLXQ14774 488 aaPredicted RBP3.55□□□□□ -1.84
CLTC-209ENST00000498711 GPR68Q15743 365 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 RPE65Q16518 533 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 CLEC12AQ5QGZ9 265 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 FAM27D1Q5T7N8 215 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 ABLIM2Q6H8Q1 611 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 TMEM81Q6P7N7 255 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 FAM111BQ6SJ93 734 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 IL20RBQ6UXL0 311 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 UTS2BQ765I0 119 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 RANBP3LQ86VV4 465 aaPredicted RBP3.55□□□□□ -1.84
CLTC-209ENST00000498711 OR8H3Q8N146 312 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 STPG2Q8N412 459 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 OR2L3Q8NG85 312 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 OR9A2Q8NGT5 310 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 OR10Z1Q8NGY1 313 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 PFN4Q8NHR9 129 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 FANK1Q8TC84 345 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 SCARB1Q8WTV0 552 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 HAVCR1Q96D42 359 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 C4orf36Q96KX1 117 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 DPYSL5Q9BPU6 564 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 LMF2Q9BU23 707 aaKnown RBP3.55□□□□□ -1.84
CLTC-209ENST00000498711 IFT27Q9BW83 186 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 PRDM13Q9H4Q3 707 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 MED20Q9H944 212 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 LYRM4Q9HD34 91 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 PRSS16Q9NQE7 514 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 C20orf141Q9NUB4 165 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 WNT16Q9UBV4 365 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 ZNF222Q9UK12 451 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 PILRAQ9UKJ1 303 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 DMDP11532 3685 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 TRANK1O15050 2925 aa3.55□□□□□ -1.84
CLTC-209ENST00000498711 TRAV6A0A075B6T7 132 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 CENPVL1A0A0U1RR11 272 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 FAM90A18PA6NE21 464 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 FAM90A16PA6NEW6 464 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 IFITM5A6NNB3 132 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 FAM90A9PA6NNJ1 464 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 HSPB2A8KAH6 182 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 FAM90A5PA8MXJ8 464 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 TOR1AO14656 332 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 FLRT2O43155 660 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 KRT33AO76009 404 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 GLSO94925 669 aaPredicted RBP3.54□□□□□ -1.84
CLTC-209ENST00000498711 TXNDC12O95881 172 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 CH25HO95992 272 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 HPP00738 406 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 IFNA16P05015 189 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 RHOP08100 348 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 FAM90A15PP0C7V4 464 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 FAM90A14PP0C7W9 464 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 HLA-GP17693 338 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 MPZP25189 248 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 ABCD3P28288 659 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 P2RY2P41231 377 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 LOXL3P58215 753 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 AP3S2P59780 193 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 RPS4XP62701 263 aaKnown RBP3.54□□□□□ -1.84
CLTC-209ENST00000498711 ELAVL3Q14576 367 aaKnown RBP3.54□□□□□ -1.84
CLTC-209ENST00000498711 ZNF141Q15928 474 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 HSPB2Q16082 182 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 TBR1Q16650 682 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 DUSP5Q16690 384 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 TCTE1Q5JU00 501 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 LINC01590Q5TEZ4 76 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 STPG1Q5TH74 334 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 FAM166AQ6J272 317 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 PWWP2BQ6NUJ5 590 aa3.54□□□□□ -1.84
CLTC-209ENST00000498711 FBXO42Q6P3S6 717 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms