RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 MT-ND2P03891 347 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 STSP08842 583 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PRR23D2P0DMB1 279 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 DBTP11182 482 aaKnown RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PEPDP12955 493 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF3P17036 446 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 CCNA2P20248 432 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PTNP21246 168 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PAICSP22234 425 aaKnown RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 RPL4P36578 427 aaKnown RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 SOX3P41225 446 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 EIF1P41567 113 aaKnown RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 CASP3P42574 277 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF41P51814 821 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 NUDT6P53370 316 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 GAS1P54826 345 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 EFNB1P98172 346 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 EMX1Q04741 257 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ST3GAL4Q11206 333 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 RAB40BQ12829 278 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PMS2P3Q13401 168 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 RAB39AQ14964 217 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 MFSD13AQ14CX5 517 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 NEDD8Q15843 81 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 EIF2S3LQ2VIR3 472 aaKnown RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 SYT14P1Q58G82 188 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 CLEC12AQ5QGZ9 265 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ARMC4Q5T2S8 1044 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 RNLSQ5VYX0 342 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 NXNL2Q5VZ03 156 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ARHGAP11AQ6P4F7 1023 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 DPY19L2P2Q6ZN68 376 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PLCZ1Q86YW0 608 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 CLVS1Q8IUQ0 354 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 GID4Q8IVV7 300 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 OR10G3Q8NGC4 313 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 OR4K17Q8NGC6 315 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 OR8D4Q8NGM9 314 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 OR13C2Q8NGS9 318 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 OR4Q3Q8NH05 313 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 OR6S1Q8NH40 331 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 DDIT4LQ96D03 193 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 TMEM80Q96HE8 168 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 LRR1Q96L50 414 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF582Q96NG8 517 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 MESP1Q9BRJ9 268 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ANGPTL4Q9BY76 406 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PLA2G12AQ9BZM1 189 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 RTN4RQ9BZR6 473 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 RACGAP1Q9H0H5 632 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 UBQLN3Q9H347 655 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 FKRPQ9H9S5 495 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 GPN2Q9H9Y4 310 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 AMBNQ9NP70 447 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 MRPS18AQ9NVS2 196 aaKnown RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 FKBP14Q9NWM8 211 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PAK1IP1Q9NWT1 392 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 HPF1Q9NWY4 346 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 MED11Q9P086 117 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ABI3Q9P2A4 366 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 PFDN2Q9UHV9 154 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ERRFI1Q9UJM3 462 aaPredicted RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF229Q9UJW7 825 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 OSGIN1Q9UJX0 560 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 SIGLEC7Q9Y286 467 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 WIF1Q9Y5W5 379 aa4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 ANKHD1Q8IWZ3 2542 aaKnown RBP4.76□□□□□ -1.65
HMGXB4-208ENST00000498325 SEC16AO15027 2179 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 IGKV1D-42A0A075B6H8 117 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 TRAV27A0A087WT01 109 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 TRAV20A0A0B4J274 112 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 BLOC1S5-TXNDC5H3BN57 136 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 K7EM74 188 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 M0R129 80 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 BHLHE40O14503 412 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ARPC3O15145 178 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ZNF208O43345 1280 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 SEC14L2O76054 403 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 SNX4O95219 450 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 OR6A2O95222 327 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 RAB36O95755 333 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 FADS2O95864 444 aaKnown RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 BGLAPP02818 100 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 P04436 131 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 CELA2AP08217 269 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 HTR1AP08908 422 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ASAH2BP0C7U1 165 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 LIPCP11150 499 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 APEHP13798 732 aaKnown RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 PCMT1P22061 227 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ACVR2AP27037 513 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 DCKP27707 260 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 GTF2E2P29084 291 aaKnown RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 ATP6V1E1P36543 226 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 PTGDSP41222 190 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 SLC15A1P46059 708 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 RPS5P46782 204 aaKnown RBP4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 MTNR1AP48039 350 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 MASP1P48740 699 aa4.75□□□□□ -1.65
HMGXB4-208ENST00000498325 CLK1P49759 484 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms