RNA–Protein interactions for RNA: ENST00000497044.5

SHTN1-206, Transcript of shootin 1, humanhuman

TSL 2

Gene SHTN1, Length 3,647 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-206ENST00000497044 SDR39U1Q9NRG7 319 aaPredicted RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 SIRT3Q9NTG7 399 aaPredicted RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 ANKRD10Q9NXR5 420 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 NKIRAS2Q9NYR9 191 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 TAS2R10Q9NYW0 307 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 P2RX2Q9UBL9 471 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 FBXL3Q9UKT7 428 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 MKLN1Q9UL63 735 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 RCE1Q9Y256 329 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 DTX4Q9Y2E6 619 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 A0A0G2JPF8 293 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 RNF103-CHMP3A0A140T963 221 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 UBE2QL1A1L167 161 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 HNRNPCL2B2RXH8 293 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 HNRNPCL3B7ZW38 293 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 H3BSA7 217 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 H7C1Q1 480 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 SDHDO14521 159 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 SMAD9O15198 467 aaKnown RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 UBDO15205 165 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 ZNF208O43345 1280 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 TRAPPC6AO75865 159 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 ANGPTL1O95841 491 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 TFP02787 698 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 ALDOCP09972 364 aaKnown RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 HNRNPCL4P0DMR1 293 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 TMIGD3P0DMS9 266 aaPredicted RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 TROVE2P10155 538 aaKnown RBP eCLIP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 ACP2P11117 423 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 BGNP21810 368 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 CD40LGP29965 261 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 UQCRC1P31930 480 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 BTCP35070 178 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 DDOSTP39656 456 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 HSPA13P48723 471 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 COL10A1Q03692 680 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 PMPCAQ10713 525 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 DYRK1AQ13627 763 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 P2RY6Q15077 328 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 LTB4RQ15722 352 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 ZNF672Q499Z4 452 aaPredicted RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 KLHL26Q53HC5 615 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 FNDC7Q5VTL7 733 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 SHQ1Q6PI26 577 aaKnown RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 TBPL2Q6SJ96 375 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 C16orf62Q7Z3J2 963 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 P4HA3Q7Z4N8 544 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 KCTD20Q7Z5Y7 419 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 TCTE3Q8IZS6 198 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 Q8N3U1 123 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 WDSUB1Q8N9V3 476 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 FAM71CQ8NEG0 241 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 OR5W2Q8NH69 310 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 RP9Q8TA86 221 aaKnown RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 NPIPB3Q92617 1050 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 RPL3LQ92901 407 aaKnown RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 KLHL15Q96M94 604 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 SNX18Q96RF0 628 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 ADOQ96SZ5 270 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 PCDHAC1Q9H158 963 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 DEFB127Q9H1M4 99 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 MTHFD2LQ9H903 347 aaPredicted RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 FN3KRPQ9HA64 309 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 BCL2L10Q9HD36 194 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 ACER3Q9NUN7 267 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 SLCO1C1Q9NYB5 712 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 EMC3Q9P0I2 261 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 CAMK2AQ9UQM7 478 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 HDGFL3Q9Y3E1 203 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 RHBDD3Q9Y3P4 386 aa2.71□□□□□ -1.98
SHTN1-206ENST00000497044 YLPM1P49750 1951 aaKnown RBP2.71□□□□□ -1.98
SHTN1-206ENST00000497044 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 KRTAP9-6A0A140TA67 174 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 A0A1W2PNV4 684 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 PINLYPA6NC86 204 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 GAGE10A6NGK3 116 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 ZNF724A8MTY0 619 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 KRTAP9-7A8MTY7 169 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 NPIPA2E9PIF3 369 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 NPIPA3F8WFD2 350 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 GPR171O14626 319 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 CASKO14936 926 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 ADAMDEC1O15204 470 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 ZNF264O43296 627 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 AKAP8O43823 692 aaKnown RBP2.7□□□□□ -1.98
SHTN1-206ENST00000497044 EIF1BO60739 113 aaKnown RBP2.7□□□□□ -1.98
SHTN1-206ENST00000497044 GCM2O75603 506 aaPredicted RBP2.7□□□□□ -1.98
SHTN1-206ENST00000497044 WISP2O76076 250 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 C6orf47O95873 294 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 HMGN2P05204 90 aaKnown RBP2.7□□□□□ -1.98
SHTN1-206ENST00000497044 G6PDP11413 515 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 ETS2P15036 469 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 RPS4Y1P22090 263 aaKnown RBP2.7□□□□□ -1.98
SHTN1-206ENST00000497044 PTBP1P26599 531 aaKnown RBP eCLIP2.7□□□□□ -1.98
SHTN1-206ENST00000497044 CHI3L1P36222 383 aaPredicted RBP2.7□□□□□ -1.98
SHTN1-206ENST00000497044 RPS19P39019 145 aaKnown RBP2.7□□□□□ -1.98
SHTN1-206ENST00000497044 LHX2P50458 406 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 ZNF84P51523 738 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 CRISP3P54108 245 aa2.7□□□□□ -1.98
SHTN1-206ENST00000497044 PRKCDQ05655 676 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 548.5 ms