RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 ALG12Q9BV10 488 aa12.35□□□□□ -0.43
ATPAF2-208ENST00000496852 FN3KQ9H479 309 aa12.35□□□□□ -0.43
ATPAF2-208ENST00000496852 C12orf49Q9H741 205 aa12.35□□□□□ -0.43
ATPAF2-208ENST00000496852 DNAJC27Q9NZQ0 273 aa12.35□□□□□ -0.43
ATPAF2-208ENST00000496852 VSX1Q9NZR4 365 aaPredicted RBP12.35□□□□□ -0.43
ATPAF2-208ENST00000496852 Q9UFV3 132 aa12.35□□□□□ -0.43
ATPAF2-208ENST00000496852 CHD6Q8TD26 2715 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 SLC22A23A1A5C7 686 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 HSPB2A8KAH6 182 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 AHCYL1O43865 530 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 FAM20BO75063 409 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 SLC43A1O75387 559 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 ZNF3P17036 446 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 GABRB1P18505 474 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 EEF1B2P24534 225 aaKnown RBP12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 CTSSP25774 331 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 CLRN1P58418 232 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 ITGADQ13349 1161 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 HSPB2Q16082 182 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 PHYHD1Q5SRE7 291 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 C6orf141Q5SZD1 244 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 UGT2A3Q6UWM9 527 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 CNEP1R1Q8N9A8 125 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 SYT14Q8NB59 555 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 CYB561A3Q8NBI2 242 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 RHOXF1Q8NHV9 184 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 PRR7Q8TB68 274 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 TMEM163Q8TC26 289 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 TRUB1Q8WWH5 349 aaKnown RBP12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 RND1Q92730 232 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 APH1AQ96BI3 265 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 STARD4Q96DR4 205 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 NR1H4Q96RI1 486 aaPredicted RBP12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 SFXN3Q9BWM7 321 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 LINC00470Q9BZP3 86 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 NMNAT2Q9BZQ4 307 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 SLCO5A1Q9H2Y9 848 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 HINT3Q9NQE9 182 aaKnown RBP12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 PLSCR4Q9NRQ2 329 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 GLTPQ9NZD2 209 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 MYRFQ9Y2G1 1151 aa12.34□□□□□ -0.43
ATPAF2-208ENST00000496852 HCFC1P51610 2035 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 A0A1B0GUH1 482 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 FAM183AA6NL82 134 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 PRR23D1E9PI22 279 aaPredicted RBP12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 UPK3AO75631 287 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 IL18BPO95998 194 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 RENP00797 406 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 CGAP01215 116 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 PRR23D2P0DMB1 279 aaPredicted RBP12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 CSNK1A1P48729 337 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 ZNF133P52736 654 aaPredicted RBP12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 NUDT6P53370 316 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 LGALS3BPQ08380 585 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 SMN1Q16637 294 aaKnown RBP12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 TSPO2Q5TGU0 170 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 TFAP2EQ6VUC0 442 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 BTLAQ7Z6A9 289 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 ZNF100Q8IYN0 542 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 OR6N1Q8NGY5 312 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 FNDC8Q8TC99 324 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 PTP4A1Q93096 173 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 Q96MT0 163 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 HCAR1Q9BXC0 346 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 SYT4Q9H2B2 425 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 AMBNQ9NP70 447 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 SLC7A10Q9NS82 523 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 SCN3BQ9NY72 215 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 ZNF629Q9UEG4 869 aaPredicted RBP12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 CACNA1CQ13936 2221 aa12.33□□□□□ -0.44
ATPAF2-208ENST00000496852 IGKV1D-43A0A0B4J1Z2 117 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 OR6C65A6NJZ3 312 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 PTGES3LE9PB15 166 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 XPNPEP2O43895 674 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 ENTPD6O75354 484 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 PAICSP22234 425 aaKnown RBP12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 RPS7P62081 194 aaKnown RBP12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 SNRPGP62308 76 aaKnown RBP12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 FMODQ06828 376 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 KLHL12Q53G59 568 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 THEM4Q5T1C6 240 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 PLBD1Q6P4A8 553 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 LRFN4Q6PJG9 635 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 LINGO2Q7L985 606 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 CXXC5Q7LFL8 322 aaKnown RBP12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 FJX1Q86VR8 437 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 CPOQ8IVL8 374 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 FAM26EQ8N5C1 309 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 APH1BQ8WW43 257 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 TSSK2Q96PF2 358 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 RBP7Q96R05 134 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 NUAK2Q9H093 628 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 OR51V1Q9H2C8 321 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 RERGLQ9H628 205 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 MED20Q9H944 212 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 RPRD1BQ9NQG5 326 aaKnown RBP12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 MALT1Q9UDY8 824 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 PRSS50Q9UI38 385 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 MAGEA13PA6NCF6 341 aa12.32□□□□□ -0.44
ATPAF2-208ENST00000496852 M0R3G1 203 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms