RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 SLC6A9P48067 706 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 CEACAM16Q2WEN9 425 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 RNFT1Q5M7Z0 435 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 MEX3BQ6ZN04 569 aaKnown RBP7.68□□□□□ -1.18
U2AF1-212ENST00000496462 THAP5Q7Z6K1 395 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 ZNF227Q86WZ6 799 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 GLB1L2Q8IW92 636 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 KDM8Q8N371 416 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 GJC3Q8NFK1 279 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 LILRB4Q8NHJ6 448 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 SNX18Q96RF0 628 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 FOXB1Q99853 325 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 NIPAL2Q9H841 368 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 PROK2Q9HC23 129 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 PLEK2Q9NYT0 353 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 N6AMT1Q9Y5N5 214 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 HSPE1-MOB4S4R3N1 261 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 ZC3H12DA2A288 527 aaKnown RBP7.68□□□□□ -1.18
U2AF1-212ENST00000496462 H0YJX3 145 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 TPD52L2O43399 206 aaKnown RBP7.68□□□□□ -1.18
U2AF1-212ENST00000496462 GOSR1O95249 250 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 GASTP01350 101 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 CD3EP07766 207 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 H2BFMP0C1H6 154 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 CCNOP22674 350 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 GSTT1P30711 240 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 CAPGP40121 348 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 PCYT1AP49585 367 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 DLX5P56178 289 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 C9orf135Q5VTT2 229 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 ANKRD16Q6P6B7 361 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 IZUMO2Q6UXV1 221 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 FGD2Q7Z6J4 655 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 IGFN1Q86VF2 1251 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 C10orf111Q8N326 155 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 Q8NA96 180 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 IL4I1Q96RQ9 567 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 LINC00470Q9BZP3 86 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 COQ10BQ9H8M1 238 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 BCO1Q9HAY6 547 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 RPRD1BQ9NQG5 326 aaKnown RBP7.68□□□□□ -1.18
U2AF1-212ENST00000496462 WARS2Q9UGM6 360 aaKnown RBP7.68□□□□□ -1.18
U2AF1-212ENST00000496462 RNF6Q9Y252 685 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 ERGIC3Q9Y282 383 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 FLVCR1Q9Y5Y0 555 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 EFCAB10A6NFE3 127 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 TNFSF4P23510 183 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 CFL1P23528 166 aaKnown RBP7.68□□□□□ -1.18
U2AF1-212ENST00000496462 MAPK11Q15759 364 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 BEX5Q5H9J7 111 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 ZNF283Q8N7M2 679 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 TCEANCQ8N8B7 351 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 THRSPQ92748 146 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 ZC3HAV1LQ96H79 300 aaKnown RBP7.68□□□□□ -1.18
U2AF1-212ENST00000496462 UCN2Q96RP3 112 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 INTS14Q96SY0 518 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 COPS4Q9BT78 406 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 EMC6Q9BV81 110 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 RACGAP1Q9H0H5 632 aa7.68□□□□□ -1.18
U2AF1-212ENST00000496462 PTPN13Q12923 2485 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 PRSS37A4D1T9 235 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 H0YAE9 185 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 SMAD9O15198 467 aaKnown RBP7.67□□□□□ -1.18
U2AF1-212ENST00000496462 RAD51DO75771 328 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 NTN1O95631 604 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 RGS6P49758 472 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 ADAM8P78325 824 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 MRPL28Q13084 256 aaKnown RBP7.67□□□□□ -1.18
U2AF1-212ENST00000496462 PPA1Q15181 289 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 ZMAT1Q5H9K5 638 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 C1orf162Q8NEQ5 155 aaPredicted RBP7.67□□□□□ -1.18
U2AF1-212ENST00000496462 ASB17Q8WXJ9 295 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 Q96M85 177 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 CNN2Q99439 309 aaKnown RBP7.67□□□□□ -1.18
U2AF1-212ENST00000496462 MROQ9BYG7 248 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 MED29Q9NX70 200 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.67□□□□□ -1.18
U2AF1-212ENST00000496462 DAPL1A0PJW8 107 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 SERPINA3P01011 423 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 IGHV3-9P01782 118 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 LAP3P28838 519 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 AGTR1P30556 359 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 SUCLG1P53597 346 aaKnown RBP7.67□□□□□ -1.18
U2AF1-212ENST00000496462 ZNF829Q3KNS6 432 aaPredicted RBP7.67□□□□□ -1.18
U2AF1-212ENST00000496462 CD300LDQ6UXZ3 194 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 ERI1Q8IV48 349 aaKnown RBP7.67□□□□□ -1.18
U2AF1-212ENST00000496462 C1orf174Q8IYL3 243 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 C9orf106Q8NAJ2 232 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 FAM222BQ8WU58 562 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 THEM6Q8WUY1 208 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 LIPHQ8WWY8 451 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 HCAR1Q9BXC0 346 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 CLCF1Q9UBD9 225 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 SIGLEC7Q9Y286 467 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 PMF1-BGLAPU3KQ54 211 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 CCDC88CQ9P219 2028 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 LOC100130705A0A1B0GUX0 176 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 PRODHO43272 600 aa7.67□□□□□ -1.18
U2AF1-212ENST00000496462 GCM2O75603 506 aaPredicted RBP7.67□□□□□ -1.18
U2AF1-212ENST00000496462 TRMUO75648 421 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms