RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 CHRNB3Q05901 458 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 RAB35Q15286 201 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 ADIPOQQ15848 244 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 ETFDHQ16134 617 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 HIST3H3Q16695 136 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 SWI5Q1ZZU3 235 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 ALG10Q5BKT4 473 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 ARMC4Q5T2S8 1044 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 ZNF730Q6ZMV8 503 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 PIWIL3Q7Z3Z3 882 aaKnown RBP12.55□□□□□ -0.4
PDAP1-204ENST00000496335 IGFN1Q86VF2 1251 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 SLC22A24Q8N4F4 322 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 MAPK1IP1LQ8NDC0 245 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 NOXO1Q8NFA2 376 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 MCHR2Q969V1 340 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 TNFRSF13CQ96RJ3 184 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 CCT8L2Q96SF2 557 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 SH3GL3Q99963 347 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 NMNAT1Q9HAN9 279 aaPredicted RBP12.55□□□□□ -0.4
PDAP1-204ENST00000496335 HIF3AQ9Y2N7 669 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 V9GYQ6 96 aa12.55□□□□□ -0.4
PDAP1-204ENST00000496335 HTR3EA5X5Y0 456 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 EFCAB9A8MZ26 197 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 RNF223E7ERA6 249 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 H7C417 338 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 hCG_2039718K7EN88 272 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 GMNNO75496 209 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 DIRAS1O95057 198 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 OR4A8P0C604 315 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 HSD17B1P14061 328 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 ZNF14P17017 642 aaPredicted RBP12.54□□□□□ -0.4
PDAP1-204ENST00000496335 SERPINF1P36955 418 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 GPR4P46093 362 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 NUDT6P53370 316 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 TOP3AQ13472 1001 aaPredicted RBP12.54□□□□□ -0.4
PDAP1-204ENST00000496335 FHL1Q13642 323 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 MBOAT2Q6ZWT7 520 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 CYP4Z1Q86W10 505 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 RNF113BQ8IZP6 322 aaKnown RBP12.54□□□□□ -0.4
PDAP1-204ENST00000496335 PGAM4Q8N0Y7 254 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 OR4F15Q8NGB8 312 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 OR4K5Q8NGD3 323 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 OR13C2Q8NGS9 318 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 ACOT11Q8WXI4 607 aaPredicted RBP12.54□□□□□ -0.4
PDAP1-204ENST00000496335 NANOS1Q8WY41 292 aaKnown RBP12.54□□□□□ -0.4
PDAP1-204ENST00000496335 HDAC2Q92769 488 aaKnown RBP12.54□□□□□ -0.4
PDAP1-204ENST00000496335 C7orf34Q96L11 122 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 SEPHS2Q99611 448 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 TXNIPQ9H3M7 391 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 BARX1Q9HBU1 254 aaPredicted RBP12.54□□□□□ -0.4
PDAP1-204ENST00000496335 TMEM38BQ9NVV0 291 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 NDUFAF4Q9P032 175 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 CD300AQ9UGN4 299 aa12.54□□□□□ -0.4
PDAP1-204ENST00000496335 ZNF346Q9UL40 294 aaKnown RBP12.54□□□□□ -0.4
PDAP1-204ENST00000496335 HIVEP2P31629 2446 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 CDC42EP2O14613 210 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 LY6HO94772 140 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 SLC2A10O95528 541 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 RAB36O95755 333 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 OR8G3PP0DMU2 310 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 THBS4P35443 961 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 CTXN1P60606 82 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 MXRA7P84157 204 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 VLDLRP98155 873 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 FMODQ06828 376 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 RAB39AQ14964 217 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 FXNQ16595 210 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 KRT80Q6KB66 452 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 PODNL1Q6PEZ8 512 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 OAFQ86UD1 273 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 DEFB107AQ8IZN7 70 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 FITM2Q8N6M3 262 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 CLDN22Q8N7P3 220 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 ANKS4BQ8N8V4 417 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 LRRC75AQ8NAA5 344 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 NUP37Q8NFH4 326 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 SLC7A13Q8TCU3 470 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 NMD3Q96D46 503 aaKnown RBP12.53□□□□□ -0.4
PDAP1-204ENST00000496335 REG4Q9BYZ8 158 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 GORASP2Q9H8Y8 452 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 SAMD4AQ9UPU9 718 aaKnown RBP12.53□□□□□ -0.4
PDAP1-204ENST00000496335 FAM32AQ9Y421 112 aaKnown RBP12.53□□□□□ -0.4
PDAP1-204ENST00000496335 PMF1-BGLAPU3KQ54 211 aa12.53□□□□□ -0.4
PDAP1-204ENST00000496335 CHD3Q12873 2000 aaKnown RBP12.53□□□□□ -0.4
PDAP1-204ENST00000496335 SONP18583 2426 aaKnown RBP12.53□□□□□ -0.4
PDAP1-204ENST00000496335 IGKV1D-43A0A0B4J1Z2 117 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 CENPBD1B2RD01 187 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 ARPC2O15144 300 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 UBL3O95164 117 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 FARS2O95363 451 aaKnown RBP12.52□□□□□ -0.41
PDAP1-204ENST00000496335 HEXAP06865 529 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 H1F0P07305 194 aaKnown RBP12.52□□□□□ -0.41
PDAP1-204ENST00000496335 BMP4P12644 408 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 ZNF35P13682 527 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 RHCEP18577 417 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 CDAP32320 146 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 ZNF84P51523 738 aa12.52□□□□□ -0.41
PDAP1-204ENST00000496335 RPL27P61353 136 aaKnown RBP12.52□□□□□ -0.41
PDAP1-204ENST00000496335 SNTB2Q13425 540 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms