RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 ZNF239Q16600 458 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 CCDC58Q4VC31 144 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 FAM27D1Q5T7N8 215 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 RPL22L1Q6P5R6 122 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 SNX29P2Q8IUI4 249 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 OR13C5Q8NGS8 318 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 RPS4Y2Q8TD47 263 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 KLHL15Q96M94 604 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 AMELYQ99218 206 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 SMURF1Q9HCE7 757 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 KCNG2Q9UJ96 466 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 LAMP5Q9UJQ1 280 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 COA3Q9Y2R0 106 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 IQCMA0A1B0GVH7 501 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 SULT2B1O00204 365 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 ZNF593O00488 134 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 TRAF3IP2O43734 574 aaPredicted RBP12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 UPK3AO75631 287 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 NEURL1O76050 574 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 OR8G3PP0DMU2 310 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 ZNF17P17021 662 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 CENPAP49450 140 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 GDI2P50395 445 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 BIDP55957 195 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 NANOS3P60323 173 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 RPS11P62280 158 aaKnown RBP eCLIP12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 H3F3AP84243 136 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 ATP1A1-AS1Q5TC04 95 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 NR2C2APQ86WQ0 139 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 EGFL6Q8IUX8 553 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 OTOSQ8NHW6 89 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 HSD17B8Q92506 261 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 PDCD1LG2Q9BQ51 273 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 MRPL13Q9BYD1 178 aaKnown RBP12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 ASCL3Q9NQ33 180 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 LRFN1Q9P244 771 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 KLHL13Q9P2N7 655 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 KNTC1P50748 2209 aa12.23□□□□□ -0.45
SPTBN1-205ENST00000496323 A0A087WV48 116 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 TRBV2A0A0J9YWF9 115 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 AQP7P3A6NL99 342 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 CASKO14936 926 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 NCR1O76036 304 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 MPZL1O95297 269 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 HLA-DQA2P01906 255 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 ITGA3P26006 1051 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 CRABP1P29762 137 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 SRD5A2P31213 254 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 S100A5P33763 92 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 PTGS2P35354 604 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 SLC35A1P78382 337 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 FOXO1Q12778 655 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 TRAM1Q15629 374 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 MEP1BQ16820 701 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 FAM205BPQ63HN1 556 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 TUBA3EQ6PEY2 450 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 LRRC69Q6ZNQ3 347 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 CEACAM19Q7Z692 300 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 CCDC190Q86UF4 302 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 GPAT4Q86UL3 456 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 MRPL48Q96GC5 212 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 SIGLEC12Q96PQ1 595 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 MNTQ99583 582 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 PRRX2Q99811 253 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 COL25A1Q9BXS0 654 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 KCNN2Q9H2S1 579 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 B3GNT3Q9Y2A9 372 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 SLC35F4A4IF30 521 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 PMS2P2O95744 297 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 CD1AP06126 327 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 EDNRAP25101 427 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 CD82P27701 267 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 RBMS1P29558 406 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 BLVRAP53004 296 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 AIMP2Q13155 320 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 ABHD17BQ5VST6 288 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 LIPNQ5VXI9 398 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 KCTD20Q7Z5Y7 419 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 YRDCQ86U90 279 aaKnown RBP12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 UEVLDQ8IX04 471 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 MS4A15Q8N5U1 240 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 THEM6Q8WUY1 208 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 IP6K3Q96PC2 410 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 PIGQQ9BRB3 760 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 RNF32Q9H0A6 362 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 CRNNQ9UBG3 495 aaPredicted RBP12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 TEKT2Q9UIF3 430 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 CELSR3Q9NYQ7 3312 aa12.22□□□□□ -0.45
SPTBN1-205ENST00000496323 LOC102725191A0A1B0GVB3 256 aa12.21□□□□□ -0.45
SPTBN1-205ENST00000496323 H0YC42 278 aa12.21□□□□□ -0.45
SPTBN1-205ENST00000496323 SULT1C4O75897 302 aa12.21□□□□□ -0.45
SPTBN1-205ENST00000496323 CNR1P21554 472 aa12.21□□□□□ -0.45
SPTBN1-205ENST00000496323 CALRP27797 417 aaKnown RBP12.21□□□□□ -0.45
SPTBN1-205ENST00000496323 TNFSF8P32971 234 aa12.21□□□□□ -0.45
SPTBN1-205ENST00000496323 ETV6P41212 452 aa12.21□□□□□ -0.45
SPTBN1-205ENST00000496323 PPP5CP53041 499 aa12.21□□□□□ -0.45
SPTBN1-205ENST00000496323 RAC1P63000 192 aa12.21□□□□□ -0.45
SPTBN1-205ENST00000496323 GLO1Q04760 184 aa12.21□□□□□ -0.45
SPTBN1-205ENST00000496323 EGR3Q06889 387 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms