RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 PATE4P0C8F1 98 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 CD40P25942 277 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 IFNGR2P38484 337 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 ZNF84P51523 738 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 LCN6P62502 163 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 FMODQ06828 376 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 PIGFQ07326 219 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 NPRL3Q12980 569 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 TAF11Q15544 211 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 ANKDD1AQ495B1 522 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 PGBD2Q6P3X8 592 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 SLC22A25Q6T423 547 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 TMEM108Q6UXF1 575 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 PAMR1Q6UXH9 720 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 SSX8Q7RTT4 187 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 MDP1Q86V88 176 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 CLDN22Q8N7P3 220 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 ARIH2OSQ8N7S6 290 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 FANK1Q8TC84 345 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 GNPDA2Q8TDQ7 276 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 NSMAFQ92636 917 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 RASD2Q96D21 266 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 RADILQ96JH8 1075 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 Q96M85 177 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 ZNF570Q96NI8 536 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 FOXB1Q99853 325 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 MRPL13Q9BYD1 178 aaKnown RBP8.58□□□□□ -1.04
CALD1-223ENST00000496024 NDEL1Q9GZM8 345 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 LRMDAQ9H2I8 198 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 GRHPRQ9UBQ7 328 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 POU2F3Q9UKI9 436 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 SIGLEC7Q9Y286 467 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 SAMHD1Q9Y3Z3 626 aaKnown RBP8.58□□□□□ -1.04
CALD1-223ENST00000496024 IER3IP1Q9Y5U9 82 aa8.58□□□□□ -1.04
CALD1-223ENST00000496024 MAGED1Q9Y5V3 778 aaPredicted RBP8.58□□□□□ -1.04
CALD1-223ENST00000496024 IGKV1D-43A0A0B4J1Z2 117 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 IGHV1-18A0A0C4DH31 117 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 ZNF503-AS2A6NEH8 195 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 NPIPB13A6NJU9 1138 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 NPIPB4C9JG80 1138 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 EBAG9O00559 213 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 SOCS2O14508 198 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 HS3ST1O14792 307 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 PPP1R3DO95685 299 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 IGHMP01871 453 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 RAF1P04049 648 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 CELA3BP08861 270 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 HOXB1P14653 301 aaPredicted RBP8.57□□□□□ -1.04
CALD1-223ENST00000496024 PTAFRP25105 342 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 CDAP32320 146 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 GSSP48637 474 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 IDH3GP51553 393 aaPredicted RBP8.57□□□□□ -1.04
CALD1-223ENST00000496024 HMGA2P52926 109 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 IST1P53990 364 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 CDH11P55287 796 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 FXYD6P3P58550 94 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 SGCAQ16586 387 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 SMARCD3Q6STE5 483 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 AQP11Q8NBQ7 271 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 OR4C15Q8NGM1 316 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 LILRB1Q8NHL6 650 aaPredicted RBP8.57□□□□□ -1.04
CALD1-223ENST00000496024 ZNF519Q8TB69 540 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 MAGEE2Q8TD90 523 aaPredicted RBP8.57□□□□□ -1.04
CALD1-223ENST00000496024 POP5Q969H6 163 aaKnown RBP8.57□□□□□ -1.04
CALD1-223ENST00000496024 GTPBP3Q969Y2 492 aaKnown RBP8.57□□□□□ -1.04
CALD1-223ENST00000496024 SAMD8Q96LT4 415 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 SLC38A2Q96QD8 506 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 RBP7Q96R05 134 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 KCNK17Q96T54 332 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 SH3GL3Q99963 347 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 KCNS3Q9BQ31 491 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 TMEM204Q9BSN7 226 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 OR52D1Q9H346 318 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 RERGLQ9H628 205 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 SEC61A2Q9H9S3 476 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 OBP2BQ9NPH6 170 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 TMEM38BQ9NVV0 291 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 STX18Q9P2W9 335 aaKnown RBP8.57□□□□□ -1.04
CALD1-223ENST00000496024 EDARQ9UNE0 448 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 ATP23Q9Y6H3 246 aa8.57□□□□□ -1.04
CALD1-223ENST00000496024 OTOGQ6ZRI0 2925 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 ARPC4-TTLL3A0A0A6YYG9 625 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 TEX13CA0A0J9YWL9 993 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 TCRBV3S1A0A5B6 114 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 A6NIZ1 184 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 SHISA9B4DS77 424 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 ATP6V1G2-DDX39BF2Z307 99 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 XKRYO14609 159 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 IMPA2O14732 288 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 FKBP6O75344 327 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 E2F6O75461 281 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 TIPRLO75663 272 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 CIB2O75838 187 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 ATE1O95260 518 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 FARS2O95363 451 aaKnown RBP8.56□□□□□ -1.04
CALD1-223ENST00000496024 GASTP01350 101 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 CECR9P0C854 216 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 CD53P19397 219 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 FPR3P25089 353 aa8.56□□□□□ -1.04
CALD1-223ENST00000496024 PTDSS1P48651 473 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms