RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 NDUFAF4Q9P032 175 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 CD300AQ9UGN4 299 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 HIF3AQ9Y2N7 669 aa12.76□□□□□ -0.37
ATG4B-224ENST00000494132 YLPM1P49750 1951 aaKnown RBP12.76□□□□□ -0.37
ATG4B-224ENST00000494132 IGKV1D-43A0A0B4J1Z2 117 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 IGHV2OR16-5A0A0B4J2B6 119 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 TRBV4-1A0A0J9YWV2 114 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 B2RBV5 119 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 CDC42EP2O14613 210 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 SSX4O60224 188 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 TMCC2O75069 709 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 FAM107AO95990 144 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 H1F0P07305 194 aaKnown RBP12.75□□□□□ -0.37
ATG4B-224ENST00000494132 APOBEC3AP31941 199 aaPredicted RBP12.75□□□□□ -0.37
ATG4B-224ENST00000494132 ARR3P36575 388 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 DAP3P51398 398 aaKnown RBP12.75□□□□□ -0.37
ATG4B-224ENST00000494132 CTXN1P60606 82 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 HGFACQ04756 655 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 TNK1Q13470 666 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 FHL1Q13642 323 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 CLEC12BQ2HXU8 276 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 ARMC4Q5T2S8 1044 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 C1QTNF12Q5T7M4 302 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 ZNF544Q6NX49 715 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 PODNL1Q6PEZ8 512 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 CSPG4Q6UVK1 2322 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 MBOAT2Q6ZWT7 520 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 OAFQ86UD1 273 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 CCDC197Q8NCU1 140 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 NSMAFQ92636 917 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 COX4I2Q96KJ9 171 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 C7orf34Q96L11 122 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 NSMCE2Q96MF7 247 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 CA10Q9NS85 328 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 TMEM38BQ9NVV0 291 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 MAGEL2Q9UJ55 1249 aa12.75□□□□□ -0.37
ATG4B-224ENST00000494132 ZNF346Q9UL40 294 aaKnown RBP12.75□□□□□ -0.37
ATG4B-224ENST00000494132 FAM32AQ9Y421 112 aaKnown RBP12.75□□□□□ -0.37
ATG4B-224ENST00000494132 H7C1C5 153 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 LY6HO94772 140 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 RAB36O95755 333 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 FOSL1P15407 271 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 CDAP32320 146 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 LCN6P62502 163 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 RAB1AP62820 205 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 CD47Q08722 323 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 SNTB2Q13425 540 aaKnown RBP12.74□□□□□ -0.37
ATG4B-224ENST00000494132 RAB39AQ14964 217 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 KRT72Q14CN4 511 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 SEC23BQ15437 767 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 FXNQ16595 210 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 KRT80Q6KB66 452 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 CYP2R1Q6VVX0 501 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 RINLQ6ZS11 566 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 ZNF627Q7L945 461 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 RRM2BQ7LG56 351 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 LRRC18Q8N456 261 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 SLC22A24Q8N4F4 322 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 LRRC75AQ8NAA5 344 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 OR4K5Q8NGD3 323 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 NANOS1Q8WY41 292 aaKnown RBP12.74□□□□□ -0.37
ATG4B-224ENST00000494132 PYURFQ96I23 114 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 NSL1Q96IY1 281 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 ZNF75AQ96N20 296 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 TSPAN32Q96QS1 320 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 BDH2Q9BUT1 245 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 MRPL13Q9BYD1 178 aaKnown RBP12.74□□□□□ -0.37
ATG4B-224ENST00000494132 GRIP2Q9C0E4 1043 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 TXNIPQ9H3M7 391 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 GORASP2Q9H8Y8 452 aa12.74□□□□□ -0.37
ATG4B-224ENST00000494132 TLN2Q9Y4G6 2542 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 RNF223E7ERA6 249 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 UBL3O95164 117 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 SEMG1P04279 462 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 OR4A8P0C604 315 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 ZNF14P17017 642 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-224ENST00000494132 ZNF26P17031 533 aaPredicted RBP12.73□□□□□ -0.37
ATG4B-224ENST00000494132 RHCEP18577 417 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 ATP6V1B2P21281 511 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 THBS4P35443 961 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 RPL4P36578 427 aaKnown RBP12.73□□□□□ -0.37
ATG4B-224ENST00000494132 SLC9A3P48764 834 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 ERVK-25P63136 954 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 SPIBQ01892 262 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 HIST3H3Q16695 136 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 MST1LQ2TV78 715 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 C3orf36Q3SXR2 165 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 IQCCQ4KMZ1 466 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 PIWIL3Q7Z3Z3 882 aaKnown RBP12.73□□□□□ -0.37
ATG4B-224ENST00000494132 CCDC36Q8IYA8 594 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 CDK20Q8IZL9 346 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 RNF113BQ8IZP6 322 aaKnown RBP12.73□□□□□ -0.37
ATG4B-224ENST00000494132 FAM169BQ8N8A8 192 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 KCNK17Q96T54 332 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 NDE1Q9NXR1 346 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 IL20RAQ9UHF4 553 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 ADAM18Q9Y3Q7 739 aa12.73□□□□□ -0.37
ATG4B-224ENST00000494132 ABCA1O95477 2261 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 PDE5AO76074 875 aa12.72□□□□□ -0.37
ATG4B-224ENST00000494132 LY6G6DO95868 133 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms