RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 GON7Q9BXV9 100 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 SYNDIG1Q9H7V2 258 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 ST6GALNAC2Q9UJ37 374 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 NOS1APO75052 506 aaPredicted RBP12.48□□□□□ -0.41
VCP-207ENST00000493886 FZD7O75084 574 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 F13BP05160 661 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 PGCP20142 388 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 CXCR1P25024 350 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 GIFP27352 417 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 GRPRP30550 384 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 NRG3P56975 720 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 RPL18Q07020 188 aaKnown RBP12.48□□□□□ -0.41
VCP-207ENST00000493886 NKAIN1Q4KMZ8 207 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 NUP54Q7Z3B4 507 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 SNX33Q8WV41 574 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 PIGKQ92643 395 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 CREB3L1Q96BA8 519 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 CDCP1Q9H5V8 836 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 NKIRAS2Q9NYR9 191 aa12.48□□□□□ -0.41
VCP-207ENST00000493886 A0A0G2JK05 382 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 IGHV5-10-1A0A0J9YXX1 117 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 GLCEO94923 617 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 PDGFBP01127 241 aaPredicted RBP12.47□□□□□ -0.41
VCP-207ENST00000493886 CXCL3P19876 107 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 SDHAP31040 664 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 MAGEB1P43366 347 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 RNF4P78317 190 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 WDR5BQ86VZ2 330 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 PELI1Q96FA3 418 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 MS4A3Q96HJ5 214 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 MESP1Q9BRJ9 268 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 RARRES3Q9UL19 164 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 COPS3Q9UNS2 423 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 AK6Q9Y3D8 172 aaKnown RBP12.47□□□□□ -0.41
VCP-207ENST00000493886 IDSB3KWA1 339 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 FADS1O60427 444 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 CDC40O60508 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
VCP-207ENST00000493886 SCRG1O75711 98 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 SC5DO75845 299 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 MT-ND4P03905 459 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 HIST1H2ABP04908 130 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 GP1BBP13224 206 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 ATF1P18846 271 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 GBX2P52951 348 aaPredicted RBP12.47□□□□□ -0.41
VCP-207ENST00000493886 PLA1AQ53H76 456 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 LINC01590Q5TEZ4 76 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 PWWP2BQ6NUJ5 590 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 HIST3H2AQ7L7L0 130 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 ANKRD37Q7Z713 158 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 PLCZ1Q86YW0 608 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 ZBTB44Q8NCP5 570 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 OR11H7Q8NGC8 314 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 ACOT12Q8WYK0 555 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 HIST1H2ACQ93077 130 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 MNTQ99583 582 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 GAL3ST1Q99999 423 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 PDCD1LG2Q9BQ51 273 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 ALG12Q9BV10 488 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 NIPAL2Q9H841 368 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 FKRPQ9H9S5 495 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 NCDNQ9UBB6 729 aa12.47□□□□□ -0.41
VCP-207ENST00000493886 TNRC6BQ9UPQ9 1833 aaKnown RBP12.46□□□□□ -0.41
VCP-207ENST00000493886 FAM171A2A8MVW0 826 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 OGG1O15527 345 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 AHCYP23526 432 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 PSMB10P40306 273 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 SLC25A1P53007 311 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 RPP30P78346 268 aaKnown RBP12.46□□□□□ -0.41
VCP-207ENST00000493886 TNK1Q13470 666 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 RIN1Q13671 783 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 CBFBQ13951 182 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 TIGD3Q6B0B8 471 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 MS4A15Q8N5U1 240 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 MAFAQ8NHW3 353 aaPredicted RBP12.46□□□□□ -0.41
VCP-207ENST00000493886 SEMA4CQ9C0C4 833 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 WNT5BQ9H1J7 359 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 AUNIPQ9H7T9 357 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 PCNX3Q9H6A9 2034 aa12.46□□□□□ -0.41
VCP-207ENST00000493886 TXNDC12O95881 172 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 ADRB1P08588 477 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 RAB3BP20337 219 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 RBMS1P29558 406 aaKnown RBP12.46□□□□□ -0.42
VCP-207ENST00000493886 P2RX1P51575 399 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 CDK5R1Q15078 307 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 ESCO2Q56NI9 601 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 CYB5R2Q6BCY4 276 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 C16orf47Q6ZP98 133 aaPredicted RBP12.46□□□□□ -0.42
VCP-207ENST00000493886 PXKQ7Z7A4 578 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 SIAH3Q8IW03 269 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 TOMM5Q8N4H5 51 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 EXD3Q8N9H8 876 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 APCDD1LQ8NCL9 501 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 CCDC74BQ96LY2 380 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 TSSK2Q96PF2 358 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 OR14A2Q96R54 314 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 GRHPRQ9UBQ7 328 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 GNG8Q9UK08 70 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 MGAT4AQ9UM21 535 aa12.46□□□□□ -0.42
VCP-207ENST00000493886 POM121CA8CG34 1229 aa12.45□□□□□ -0.42
VCP-207ENST00000493886 H3BSH0 61 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms