RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 GABARAPH6UMI1 98 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 GABARAPO95166 117 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 CHRM2P08172 466 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 TMEM240Q5SV17 173 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 CST9LP1Q5W188 147 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 THOC3Q96J01 351 aaKnown RBP14.99□□□□□ -0.01
BRAT1-206ENST00000493232 LRFN5Q96NI6 719 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 ELF4Q99607 663 aaPredicted RBP14.99□□□□□ -0.01
BRAT1-206ENST00000493232 NECAP2Q9NVZ3 263 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 ALS2Q96Q42 1657 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 COL16A1Q07092 1604 aaPredicted RBP14.99□□□□□ -0.01
BRAT1-206ENST00000493232 GFYI3L273 518 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 HEXAP06865 529 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 NID1P14543 1247 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 RPS2P15880 293 aaKnown RBP14.99□□□□□ -0.01
BRAT1-206ENST00000493232 LGALS4P56470 323 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 DOK3Q7L591 496 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 RASD2Q96D21 266 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 FBXO24O75426 580 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 MYOGP15173 224 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 ZMAT1Q5H9K5 638 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 TDHQ8IZJ6 230 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 LILRA2Q8N149 483 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 RBMXL3Q8N7X1 1067 aaKnown RBP14.99□□□□□ -0.01
BRAT1-206ENST00000493232 OR51A2Q8NGJ7 313 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 INTS12Q96CB8 462 aaKnown RBP14.99□□□□□ -0.01
BRAT1-206ENST00000493232 ARPC5LQ9BPX5 153 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 TBC1D29Q9UFV1 150 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 HSPB6O14558 160 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 PIP5K1CO60331 668 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 KIR2DL3P43628 341 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 HNF4GQ14541 408 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 DUSP5Q16690 384 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 KDM4DQ6B0I6 523 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 FCRL6Q6DN72 434 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 SVBPQ8N300 66 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 MZB1Q8WU39 189 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 KCNJ15Q99712 375 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 C1QTNF3Q9BXJ4 246 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 GALNT9Q9HCQ5 603 aa14.99□□□□□ -0.01
BRAT1-206ENST00000493232 NSA2O95478 260 aaKnown RBP14.98□□□□□ -0.01
BRAT1-206ENST00000493232 LGI1O95970 557 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 SNRNP70P08621 437 aaKnown RBP14.98□□□□□ -0.01
BRAT1-206ENST00000493232 SHEQ5VZ18 495 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 FUNDC1Q8IVP5 155 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 BTF3L4Q96K17 158 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 CHRNA9Q9UGM1 479 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 PIGLQ9Y2B2 252 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 CLDN1O95832 211 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 CD22P20273 847 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 SSTR2P30874 369 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 EPHA5P54756 1037 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 HMGN3Q15651 99 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 NAA50Q9GZZ1 169 aaKnown RBP14.98□□□□□ -0.01
BRAT1-206ENST00000493232 NWD2Q9ULI1 1742 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 AGAP14A8MT82 685 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 MMP11P24347 488 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 PTBP1P26599 531 aaKnown RBP eCLIP14.98□□□□□ -0.01
BRAT1-206ENST00000493232 SMAD4Q13485 552 aaKnown RBP14.98□□□□□ -0.01
BRAT1-206ENST00000493232 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.98□□□□□ -0.01
BRAT1-206ENST00000493232 NRARPQ7Z6K4 114 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 CPEB3Q8NE35 698 aaKnown RBP14.98□□□□□ -0.01
BRAT1-206ENST00000493232 PLPP5Q8NEB5 264 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 SLC25A21Q9BQT8 299 aaPredicted RBP14.98□□□□□ -0.01
BRAT1-206ENST00000493232 CHST8Q9H2A9 424 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 SGCEO43556 437 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 TGM6O95932 706 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 ELK1P19419 428 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 GLYATL3Q5SZD4 288 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 MDGA2Q7Z553 956 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 SEMA6DQ8NFY4 1073 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 IFI44Q8TCB0 444 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 CHST11Q9NPF2 352 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.98□□□□□ -0.01
BRAT1-206ENST00000493232 TMEM202A6NGA9 273 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 ATP1B1P05026 303 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 GNB3P16520 340 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 SHHQ15465 462 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 EMC4Q5J8M3 183 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 H1FXQ92522 213 aaKnown RBP14.98□□□□□ -0.01
BRAT1-206ENST00000493232 TCEAL7Q9BRU2 100 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 RTL8AQ9BWD3 113 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 SAMD10Q9BYL1 202 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 ZNF355PQ9NSJ1 428 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 COQ3Q9NZJ6 369 aa14.98□□□□□ -0.01
BRAT1-206ENST00000493232 LCMT2O60294 686 aaKnown RBP14.97□□□□□ -0.01
BRAT1-206ENST00000493232 CLN5O75503 358 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 EDDM3BP56851 147 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 BAXQ07812 192 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 BEX5Q5H9J7 111 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 SYT6Q5T7P8 510 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-206ENST00000493232 GLIPR1L1Q6UWM5 242 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 ZNF687Q8N1G0 1237 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 PIGTQ969N2 578 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 Q96M85 177 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 UBE2ZQ9H832 354 aaPredicted RBP14.97□□□□□ -0.01
BRAT1-206ENST00000493232 SPACA1Q9HBV2 294 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 GFOD1Q9NXC2 390 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 UGT2A1Q9Y4X1 527 aa14.97□□□□□ -0.01
BRAT1-206ENST00000493232 KIR2DS1A0A191URI9 304 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms