RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 TMEM38BQ9NVV0 291 aa12.96□□□□□ -0.33
TOM1-215ENST00000491987 RHCGQ9UBD6 479 aa12.96□□□□□ -0.33
TOM1-215ENST00000491987 SNX13Q9Y5W8 968 aa12.96□□□□□ -0.33
TOM1-215ENST00000491987 TLN2Q9Y4G6 2542 aa12.96□□□□□ -0.34
TOM1-215ENST00000491987 CSPG4Q6UVK1 2322 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 TMEM129A0AVI4 362 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 SH3PXD2BA1X283 911 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 ATP8B1O43520 1251 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 TLX2O43763 284 aaPredicted RBP12.95□□□□□ -0.34
TOM1-215ENST00000491987 CRLF1O75462 422 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 TRMUO75648 421 aaKnown RBP12.95□□□□□ -0.34
TOM1-215ENST00000491987 IFNW1P05000 195 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 OR8G3PP0DMU2 310 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 IFI30P13284 250 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 ACADSP16219 412 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 FUT4P22083 530 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 NR4A1P22736 598 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 LAPTM4AQ15012 233 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 C8orf82Q6P1X6 216 aaPredicted RBP12.95□□□□□ -0.34
TOM1-215ENST00000491987 CDK20Q8IZL9 346 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 OR4K5Q8NGD3 323 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 LIPHQ8WWY8 451 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 MCHR2Q969V1 340 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 DOK1Q99704 481 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 MRPL13Q9BYD1 178 aaKnown RBP12.95□□□□□ -0.34
TOM1-215ENST00000491987 FAM107BQ9H098 131 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 DYNLRB1Q9NP97 96 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 CMAHPQ9Y471 501 aa12.95□□□□□ -0.34
TOM1-215ENST00000491987 ENTPD5O75356 428 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 FARS2O95363 451 aaKnown RBP12.94□□□□□ -0.34
TOM1-215ENST00000491987 SERPINA1P01009 418 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 TSPAN19P0C672 248 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 ZNF35P13682 527 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 NCK1P16333 377 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 ZNF84P51523 738 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 GALK2Q01415 458 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 TOP3AQ13472 1001 aaPredicted RBP12.94□□□□□ -0.34
TOM1-215ENST00000491987 HIST3H3Q16695 136 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 MSMPQ1L6U9 139 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 IFI44LQ53G44 452 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 ALG10Q5BKT4 473 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 ARMC4Q5T2S8 1044 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 HACD2Q6Y1H2 254 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 CBLL1Q75N03 491 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 HDDC2Q7Z4H3 204 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 MEX3DQ86XN8 651 aaKnown RBP12.94□□□□□ -0.34
TOM1-215ENST00000491987 ZNF584Q8IVC4 421 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 OFCC1Q8IZS5 231 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 ZCCHC24Q8N2G6 241 aaKnown RBP12.94□□□□□ -0.34
TOM1-215ENST00000491987 GEMIN6Q8WXD5 167 aaKnown RBP12.94□□□□□ -0.34
TOM1-215ENST00000491987 FAM162AQ96A26 154 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 BPIFA2Q96DR5 249 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 HSH2DQ96JZ2 352 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 SEPHS2Q99611 448 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 KCTD14Q9BQ13 255 aaPredicted RBP12.94□□□□□ -0.34
TOM1-215ENST00000491987 PIMREGQ9BSJ6 248 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 FNDC11Q9BVV2 318 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 RAB1BQ9H0U4 201 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 MYLK2Q9H1R3 596 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 RNF121Q9H920 327 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 MAN2C1Q9NTJ4 1040 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 FBXO9Q9UK97 447 aaPredicted RBP12.94□□□□□ -0.34
TOM1-215ENST00000491987 ADAM21Q9UKJ8 722 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 FBXL3Q9UKT7 428 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 HIF3AQ9Y2N7 669 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 SPEF1Q9Y4P9 236 aa12.94□□□□□ -0.34
TOM1-215ENST00000491987 KIAA1324LA8MWY0 1029 aaPredicted RBP12.93□□□□□ -0.34
TOM1-215ENST00000491987 CENPBD1B2RD01 187 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 VWC2LB2RUY7 222 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 FFAR1O14842 300 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 SLC2A10O95528 541 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 SERPINA5P05154 406 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 ADRA2AP08913 450 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 SAGP10523 405 aaPredicted RBP12.93□□□□□ -0.34
TOM1-215ENST00000491987 MAKP20794 623 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 USF1P22415 310 aaPredicted RBP12.93□□□□□ -0.34
TOM1-215ENST00000491987 LSP1P33241 339 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 PSME3P61289 254 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 VLDLRP98155 873 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 GGTLC2Q14390 218 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 TRAM2Q15035 370 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 C6orf52Q5T4I8 152 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 GKAP1Q5VSY0 366 aaPredicted RBP12.93□□□□□ -0.34
TOM1-215ENST00000491987 TMEM53Q6P2H8 277 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 FKBP9P1Q75LS8 142 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 SLC16A14Q7RTX9 510 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 IGFN1Q86VF2 1251 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 NRMQ8IXM6 262 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 HDAC2Q92769 488 aaKnown RBP12.93□□□□□ -0.34
TOM1-215ENST00000491987 MRPL24Q96A35 216 aaKnown RBP12.93□□□□□ -0.34
TOM1-215ENST00000491987 CMTM5Q96DZ9 223 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 MRPL37Q9BZE1 423 aaKnown RBP12.93□□□□□ -0.34
TOM1-215ENST00000491987 ARFGEF3Q5TH69 2177 aa12.93□□□□□ -0.34
TOM1-215ENST00000491987 TRAV27A0A087WT01 109 aa12.92□□□□□ -0.34
TOM1-215ENST00000491987 LOC390937A0A1W2PQ73 354 aa12.92□□□□□ -0.34
TOM1-215ENST00000491987 NPIPB13A6NJU9 1138 aa12.92□□□□□ -0.34
TOM1-215ENST00000491987 A8MV72 311 aaPredicted RBP12.92□□□□□ -0.34
TOM1-215ENST00000491987 NPIPB4C9JG80 1138 aa12.92□□□□□ -0.34
TOM1-215ENST00000491987 NDUFS8O00217 210 aa12.92□□□□□ -0.34
TOM1-215ENST00000491987 NDUFAB1O14561 156 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms